Difference between revisions of "SJ05388"

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(Created page with "Category:gene == Gene SJ02171 == * transcription-direction: ** negative * right-end-position: ** 183054 * left-end-position: ** 181131 * centisome-position: ** 33.326466...")
(Created page with "Category:gene == Gene SJ22334 == * transcription-direction: ** positive * right-end-position: ** 111189 * left-end-position: ** 93285 * centisome-position: ** 52.413486...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02171 ==
+
== Gene SJ22334 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 183054
+
** 111189
 
* left-end-position:
 
* left-end-position:
−
** 181131
+
** 93285
 
* centisome-position:
 
* centisome-position:
−
** 33.326466    
+
** 52.413486    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEROXID-RXN]]
+
* [[AN2PT]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-14240]]
+
* [[NAD-KIN-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[NADPHOS-DEPHOS-PWY-1]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[PWY-7269]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[PWY-7268]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6824]]
+
* [[NADPHOS-DEPHOS-PWY]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5469]]
+
* [[PWY-5083]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5461]]
+
{{#set: transcription-direction=positive}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: right-end-position=111189}}
−
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=93285}}
−
{{#set: right-end-position=183054}}
+
{{#set: centisome-position=52.413486   }}
−
{{#set: left-end-position=181131}}
 
−
{{#set: centisome-position=33.326466   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=5}}

Revision as of 11:03, 15 January 2021

Gene SJ22334

  • transcription-direction:
    • positive
  • right-end-position:
    • 111189
  • left-end-position:
    • 93285
  • centisome-position:
    • 52.413486

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • NADPHOS-DEPHOS-PWY-1
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7269
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7268
    • 4 reactions found over 5 reactions in the full pathway
  • NADPHOS-DEPHOS-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway




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