Difference between revisions of "SJ11512"

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(Created page with "Category:gene == Gene SJ11538 == * transcription-direction: ** negative * right-end-position: ** 101933 * left-end-position: ** 96943 * centisome-position: ** 26.12547...")
(Created page with "Category:gene == Gene SJ14827 == * transcription-direction: ** positive * right-end-position: ** 37271 * left-end-position: ** 24783 * centisome-position: ** 6.1753097...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11538 ==
+
== Gene SJ14827 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 101933
+
** 37271
 
* left-end-position:
 
* left-end-position:
−
** 96943
+
** 24783
 
* centisome-position:
 
* centisome-position:
−
** 26.12547    
+
** 6.1753097    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[GLUCONOKIN-RXN]]
−
* [[3.1.1.64-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[3.6.3.37-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ATPASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[CARBOXYLESTERASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-10711]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-10767]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12252]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXNQT-4366]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6303]]
+
* [[PWY-5530]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7210]]
+
* [[IDNCAT-PWY]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[GLUCONSUPER-PWY]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-7184]]
+
{{#set: transcription-direction=positive}}
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=37271}}
−
* [[PWY-6545]]
+
{{#set: left-end-position=24783}}
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=6.1753097   }}
−
* [[PWY-6857]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=101933}}
 
−
{{#set: left-end-position=96943}}
 
−
{{#set: centisome-position=26.12547   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=14}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=3}}

Revision as of 11:04, 15 January 2021

Gene SJ14827

  • transcription-direction:
    • positive
  • right-end-position:
    • 37271
  • left-end-position:
    • 24783
  • centisome-position:
    • 6.1753097

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5530
    • 2 reactions found over 3 reactions in the full pathway
  • IDNCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • GLUCONSUPER-PWY
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ11512&oldid=106905"