Difference between revisions of "SJ12203"

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(Created page with "Category:gene == Gene SJ20612 == * transcription-direction: ** positive * right-end-position: ** 30441 * left-end-position: ** 21224 * centisome-position: ** 10.3364315...")
(Created page with "Category:gene == Gene SJ12575 == * transcription-direction: ** negative * right-end-position: ** 135143 * left-end-position: ** 125517 * centisome-position: ** 35.091393...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20612 ==
+
== Gene SJ12575 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 30441
+
** 135143
 
* left-end-position:
 
* left-end-position:
−
** 21224
+
** 125517
 
* centisome-position:
 
* centisome-position:
−
** 10.3364315    
+
** 35.091393    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ATPASE-RXN]]
+
* [[INDOLE-23-DIOXYGENASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8664]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[RXN-8665]]
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-7430]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-5651]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-6309]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''7''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY-7765]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7717]]
−
{{#set: right-end-position=30441}}
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
{{#set: left-end-position=21224}}
+
* [[TRPCAT-PWY]]
−
{{#set: centisome-position=10.3364315   }}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=135143}}
 +
{{#set: left-end-position=125517}}
 +
{{#set: centisome-position=35.091393   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=6}}

Revision as of 11:05, 15 January 2021

Gene SJ12575

  • transcription-direction:
    • negative
  • right-end-position:
    • 135143
  • left-end-position:
    • 125517
  • centisome-position:
    • 35.091393

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7430
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5651
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-6309
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-7765
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7717
    • 3 reactions found over 6 reactions in the full pathway
  • TRPCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway




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