Difference between revisions of "SJ19720"

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(Created page with "Category:gene == Gene SJ08123 == * transcription-direction: ** positive * right-end-position: ** 52004 * left-end-position: ** 43180 * centisome-position: ** 9.700188...")
(Created page with "Category:gene == Gene SJ02117 == * transcription-direction: ** negative * right-end-position: ** 36320 * left-end-position: ** 17430 * centisome-position: ** 12.322637...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08123 ==
+
== Gene SJ02117 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 52004
+
** 36320
 
* left-end-position:
 
* left-end-position:
−
** 43180
+
** 17430
 
* centisome-position:
 
* centisome-position:
−
** 9.700188    
+
** 12.322637    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PMPOXI-RXN]]
+
* [[RXN0-1147]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PNPOXI-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PYRIDOXINE-4-OXIDASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PLPSAL-PWY]]
+
* [[PWY-5084]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7204]]
+
* [[PWY66-398]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[PYRIDOXSYN-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=36320}}
−
* [[PWY-7282]]
+
{{#set: left-end-position=17430}}
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
{{#set: centisome-position=12.322637   }}
−
* [[PWY-5499]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=52004}}
 
−
{{#set: left-end-position=43180}}
 
−
{{#set: centisome-position=9.700188   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=2}}

Revision as of 11:05, 15 January 2021

Gene SJ02117

  • transcription-direction:
    • negative
  • right-end-position:
    • 36320
  • left-end-position:
    • 17430
  • centisome-position:
    • 12.322637

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5084
    • 3 reactions found over 3 reactions in the full pathway
  • PWY66-398
    • 10 reactions found over 10 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19720&oldid=107405"