Difference between revisions of "SJ06261"
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(Created page with "Category:gene == Gene SJ20720 == * transcription-direction: ** positive * right-end-position: ** 152992 * left-end-position: ** 139540 * centisome-position: ** 68.30453...") |
(Created page with "Category:gene == Gene SJ05483 == * transcription-direction: ** positive * right-end-position: ** 473424 * left-end-position: ** 461375 * centisome-position: ** 93.11716...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ05483 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 473424 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 461375 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 93.11716 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * [[ | + | * [[1.14.19.3-RXN]] |
− | |||
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-11680]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-11681]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-11682]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-13426]] |
− | ** Category: [[ | + | ** Category: [[orthology]] |
− | *** source: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | * [[RXN- | + | * [[RXN-16065]] |
− | ** Category: [[ | + | ** Category: [[orthology]] |
− | *** source: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | * [[RXN- | + | * [[RXN-16132]] |
− | ** Category: [[ | + | ** Category: [[orthology]] |
− | *** source: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | * [[RXN- | + | * [[RXN-17112]] |
− | ** Category: [[ | + | ** Category: [[orthology]] |
− | *** source: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | * [[RXN- | + | * [[RXN-8347]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
</div> | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-6000]] |
− | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-6603]] |
− | ** ''' | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-5353]] |
− | ** ''' | + | ** '''7''' reactions found over '''8''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-7049]] |
− | ** ''' | + | ** '''4''' reactions found over '''7''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-7606]] |
− | ** ''' | + | ** '''8''' reactions found over '''14''' reactions in the full pathway |
− | * [[ | + | * [[PWY-7726]] |
− | ** ''' | + | ** '''8''' reactions found over '''13''' reactions in the full pathway |
− | * [[ | + | * [[PWY-6958]] |
− | ** ''' | + | ** '''5''' reactions found over '''8''' reactions in the full pathway |
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=473424}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=461375}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=93.11716 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=9}} |
{{#set: nb pathway associated=7}} | {{#set: nb pathway associated=7}} |
Revision as of 11:08, 15 January 2021
Contents
Gene SJ05483
- transcription-direction:
- positive
- right-end-position:
- 473424
- left-end-position:
- 461375
- centisome-position:
- 93.11716
Organism(s) associated with this gene
Reaction(s) associated
- 1.14.19.3-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-11680
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11681
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11682
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13426
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-16065
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-16132
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-17112
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-8347
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6000
- 2 reactions found over 2 reactions in the full pathway
- PWY-6603
- 4 reactions found over 4 reactions in the full pathway
- PWY-5353
- 7 reactions found over 8 reactions in the full pathway
- PWY-7049
- 4 reactions found over 7 reactions in the full pathway
- PWY-7606
- 8 reactions found over 14 reactions in the full pathway
- PWY-7726
- 8 reactions found over 13 reactions in the full pathway
- PWY-6958
- 5 reactions found over 8 reactions in the full pathway