Difference between revisions of "SJ00076"

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(Created page with "Category:gene == Gene SJ13641 == * transcription-direction: ** negative * right-end-position: ** 199266 * left-end-position: ** 181632 * centisome-position: ** 54.706455...")
(Created page with "Category:gene == Gene SJ08899 == * transcription-direction: ** positive * right-end-position: ** 12960 * left-end-position: ** 12466 * centisome-position: ** 26.531305...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13641 ==
+
== Gene SJ08899 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 199266
+
** 12960
 
* left-end-position:
 
* left-end-position:
−
** 181632
+
** 12466
 
* centisome-position:
 
* centisome-position:
−
** 54.706455    
+
** 26.531305    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.1.26.4-RXN]]
−
* [[2.1.1.79-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-7421]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN1G-2544]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=positive}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=12960}}
−
* [[RXN1G-3641]]
+
{{#set: left-end-position=12466}}
−
** Category: [[annotation]]
+
{{#set: centisome-position=26.531305   }}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[PWY0-541]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-4942]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWYG-321]]
 
−
** '''26''' reactions found over '''182''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=199266}}
 
−
{{#set: left-end-position=181632}}
 
−
{{#set: centisome-position=54.706455   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=3}}
 

Revision as of 11:10, 15 January 2021

Gene SJ08899

  • transcription-direction:
    • positive
  • right-end-position:
    • 12960
  • left-end-position:
    • 12466
  • centisome-position:
    • 26.531305

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ00076&oldid=109388"