Difference between revisions of "RXN-15775"

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(Created page with "Category:reaction == Reaction HOMOCYSMETB12-RXN == * direction: ** left-to-right * common-name: ** methionine synthase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.1...")
(Created page with "Category:reaction == Reaction ADENPRIBOSYLTRAN-RXN == * direction: ** left-to-right * common-name: ** adenine phosphoribosyltransferase * ec-number: ** [http://enzyme.expa...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HOMOCYSMETB12-RXN ==
+
== Reaction ADENPRIBOSYLTRAN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** methionine synthase
+
** adenine phosphoribosyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.13 ec-2.1.1.13]
+
** [http://enzyme.expasy.org/EC/2.4.2.7 ec-2.4.2.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-METHYL-THF-GLU-N]][c] '''+''' 1 [[HOMO-CYS]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[THF-GLU-N]][c]
+
* 1 [[ADENINE]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03226]]
+
* Gene: [[SJ15126]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12523]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
+
* [[PWY-7807]], glyphosate degradation III:
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[HSERMETANA-PWY]], L-methionine biosynthesis III:
+
* [[PWY-6610]], adenine salvage:
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-3841]], folate transformations II (plants):
+
* [[PWY-7805]], (aminomethyl)phosphonate degradation:
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[1CMET2-PWY]], folate transformations III (E. coli):
+
* [[PWY-6605]], adenine and adenosine salvage II:
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[ADENOSYLHOMOCYSCAT-PWY]], L-methionine salvage from L-homocysteine:
+
* [[P121-PWY]], adenine and adenosine salvage I:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-2201]], folate transformations I:
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11173 11173]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16609 16609]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00946 R00946]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00190 R00190]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q57195 Q57195]
+
** [http://www.uniprot.org/uniprot/P12426 P12426]
−
** [http://www.uniprot.org/uniprot/Q9RVQ6 Q9RVQ6]
+
** [http://www.uniprot.org/uniprot/Q9X1A4 Q9X1A4]
−
** [http://www.uniprot.org/uniprot/O33259 O33259]
+
** [http://www.uniprot.org/uniprot/P47202 P47202]
−
** [http://www.uniprot.org/uniprot/Q55786 Q55786]
+
** [http://www.uniprot.org/uniprot/O34443 O34443]
−
** [http://www.uniprot.org/uniprot/Q09582 Q09582]
+
** [http://www.uniprot.org/uniprot/O25296 O25296]
−
** [http://www.uniprot.org/uniprot/Q9Z2Q4 Q9Z2Q4]
+
** [http://www.uniprot.org/uniprot/P47518 P47518]
−
** [http://www.uniprot.org/uniprot/P13009 P13009]
+
** [http://www.uniprot.org/uniprot/Q9PP06 Q9PP06]
 +
** [http://www.uniprot.org/uniprot/P43856 P43856]
 +
** [http://www.uniprot.org/uniprot/O51718 O51718]
 +
** [http://www.uniprot.org/uniprot/Q9ZLQ9 Q9ZLQ9]
 +
** [http://www.uniprot.org/uniprot/P69503 P69503]
 +
** [http://www.uniprot.org/uniprot/P07741 P07741]
 +
** [http://www.uniprot.org/uniprot/P08030 P08030]
 +
** [http://www.uniprot.org/uniprot/P31166 P31166]
 +
** [http://www.uniprot.org/uniprot/P36973 P36973]
 +
** [http://www.uniprot.org/uniprot/P52561 P52561]
 +
** [http://www.uniprot.org/uniprot/Q42563 Q42563]
 +
** [http://www.uniprot.org/uniprot/Q49639 Q49639]
 +
** [http://www.uniprot.org/uniprot/P73935 P73935]
 +
** [http://www.uniprot.org/uniprot/Q9SUW2 Q9SUW2]
 +
** [http://www.uniprot.org/uniprot/Q43199 Q43199]
 +
** [http://www.uniprot.org/uniprot/Q9SU38 Q9SU38]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=methionine synthase}}
+
{{#set: common-name=adenine phosphoribosyltransferase}}
−
{{#set: ec-number=ec-2.1.1.13}}
+
{{#set: ec-number=ec-2.4.2.7}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=5}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 18:59, 14 January 2021

Reaction ADENPRIBOSYLTRAN-RXN

  • direction:
    • left-to-right
  • common-name:
    • adenine phosphoribosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7807, glyphosate degradation III:
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6610, adenine salvage:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7805, (aminomethyl)phosphonate degradation:
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6605, adenine and adenosine salvage II:
    • 1 reactions found over 2 reactions in the full pathway
  • P121-PWY, adenine and adenosine salvage I:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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