Difference between revisions of "1.1.4.1-RXN"

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(Created page with "Category:reaction == Reaction RXN-9 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.3 ec-2.1.3] == Reaction formula == * 1 [[CARBAMOYL-P]...")
(Created page with "Category:reaction == Reaction RXN-7968 == * direction: ** left-to-right * common-name: ** shikimate 3-dehydrogenase (nadp+) * ec-number: ** [http://enzyme.expasy.org/EC/1....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-9 ==
+
== Reaction RXN-7968 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** shikimate 3-dehydrogenase (nadp+)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.3 ec-2.1.3]
+
** [http://enzyme.expasy.org/EC/1.1.1.282 ec-1.1.1.282]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CARBAMOYL-P]][c] '''+''' 1 [[L-CANALINE]][c] '''=>''' 1 [[O-UREIDOHOMOSERINE]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[SHIKIMATE]][c] '''=>''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18541]]
+
* Gene: [[SJ10493]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5]], canavanine biosynthesis:
+
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate:
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.1.3}}
+
{{#set: common-name=shikimate 3-dehydrogenase (nadp+)}}
 +
{{#set: ec-number=ec-1.1.1.282}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:00, 14 January 2021

Reaction RXN-7968

  • direction:
    • left-to-right
  • common-name:
    • shikimate 3-dehydrogenase (nadp+)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate:
    • 6 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=1.1.4.1-RXN&oldid=101002"