Difference between revisions of "GLUCONOLACT-RXN"
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(Created page with "Category:reaction == Reaction 3.1.27.9-RXN == * direction: ** left-to-right * common-name: ** trna-splicing endonuclease subunit sen2 * ec-number: ** [http://enzyme.expasy...") |
(Created page with "Category:reaction == Reaction HISTIDINE--TRNA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** histidine-trna ligase * ec-number: ** [http://enzyme.expasy.org...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction HISTIDINE--TRNA-LIGASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** trna | + | ** histidine-trna ligase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.1.1.21 ec-6.1.1.21] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[HIS]][c] '''+''' 1 [[HIS-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-HIS-tRNAs]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ21166]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | * Gene: [[ | + | ** Category: [[orthology]] |
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ07221]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[ | + | * [[TRNA-CHARGING-PWY]], tRNA charging: |
− | + | ** '''21''' reactions found over '''21''' reactions in the full pathway | |
− | |||
− | ** ''' | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17314 17314] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03655 R03655] | ||
* UNIPROT: | * UNIPROT: | ||
− | ** [http://www.uniprot.org/uniprot/ | + | ** [http://www.uniprot.org/uniprot/Q9X0H5 Q9X0H5] |
+ | ** [http://www.uniprot.org/uniprot/O58028 O58028] | ||
+ | ** [http://www.uniprot.org/uniprot/O67223 O67223] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZK27 Q9ZK27] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PPF4 Q9PPF4] | ||
+ | ** [http://www.uniprot.org/uniprot/P56455 P56455] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58406 Q58406] | ||
+ | ** [http://www.uniprot.org/uniprot/O32039 O32039] | ||
+ | ** [http://www.uniprot.org/uniprot/O51160 O51160] | ||
+ | ** [http://www.uniprot.org/uniprot/O66522 O66522] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZDL9 Q9ZDL9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JUZ9 Q9JUZ9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CE78 Q9CE78] | ||
+ | ** [http://www.uniprot.org/uniprot/P47281 P47281] | ||
+ | ** [http://www.uniprot.org/uniprot/O34459 O34459] | ||
+ | ** [http://www.uniprot.org/uniprot/O83647 O83647] | ||
+ | ** [http://www.uniprot.org/uniprot/O84547 O84547] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z7P1 Q9Z7P1] | ||
+ | ** [http://www.uniprot.org/uniprot/P43823 P43823] | ||
+ | ** [http://www.uniprot.org/uniprot/Q61035 Q61035] | ||
+ | ** [http://www.uniprot.org/uniprot/P30053 P30053] | ||
+ | ** [http://www.uniprot.org/uniprot/P46696 P46696] | ||
+ | ** [http://www.uniprot.org/uniprot/P51348 P51348] | ||
+ | ** [http://www.uniprot.org/uniprot/P75069 P75069] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55653 Q55653] | ||
+ | ** [http://www.uniprot.org/uniprot/Q49027 Q49027] | ||
+ | ** [http://www.uniprot.org/uniprot/P07263 P07263] | ||
+ | ** [http://www.uniprot.org/uniprot/P60906 P60906] | ||
+ | ** [http://www.uniprot.org/uniprot/P12081 P12081] | ||
+ | ** [http://www.uniprot.org/uniprot/P93422 P93422] | ||
+ | ** [http://www.uniprot.org/uniprot/O82413 O82413] | ||
+ | </div> | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name=trna | + | {{#set: common-name=histidine-trna ligase}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-6.1.1.21}} |
{{#set: nb gene associated=2}} | {{#set: nb gene associated=2}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 19:02, 14 January 2021
Contents
Reaction HISTIDINE--TRNA-LIGASE-RXN
- direction:
- left-to-right
- common-name:
- histidine-trna ligase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ21166
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ07221
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- TRNA-CHARGING-PWY, tRNA charging:
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links