Difference between revisions of "RXN-14277"

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(Created page with "Category:reaction == Reaction RXN-16401 == * direction: ** left-to-right * common-name: ** long-chain fatty acid-coa ligase * ec-number: ** [http://enzyme.expasy.org/EC/6....")
(Created page with "Category:reaction == Reaction RXN-14520 == * direction: ** left-to-right * common-name: ** 7-(3-amino-3-methylcarboxypropyl)-wyosine carboxycarbonylase * ec-number: ** [ht...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-16401 ==
+
== Reaction RXN-14520 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** long-chain fatty acid-coa ligase
+
** 7-(3-amino-3-methylcarboxypropyl)-wyosine carboxycarbonylase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/2.3.1.231 ec-2.3.1.231]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17640]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-17641]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[yW-58]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[tRNAPhe-wybutosine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ13616]]
* Gene: [[SJ08690]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ13972]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ08691]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
* Gene: [[SJ05591]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ08692]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ03650]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6733]], sporopollenin precursors biosynthesis:
+
* [[PWY-7283]], wybutosine biosynthesis:
** '''8''' reactions found over '''18''' reactions in the full pathway
+
** '''3''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=37120 37120]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=long-chain fatty acid-coa ligase}}
+
{{#set: common-name=7-(3-amino-3-methylcarboxypropyl)-wyosine carboxycarbonylase}}
{{#set: ec-number=ec-6.2.1.3}}
+
{{#set: ec-number=ec-2.3.1.231}}
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 19:07, 14 January 2021

Reaction RXN-14520

  • direction:
    • left-to-right
  • common-name:
    • 7-(3-amino-3-methylcarboxypropyl)-wyosine carboxycarbonylase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7283, wybutosine biosynthesis:
    • 3 reactions found over 2 reactions in the full pathway

Reconstruction information

External links