Difference between revisions of "SJ09381"
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(Created page with "Category:gene == Gene SJ04389 == * transcription-direction: ** positive * right-end-position: ** 35132 * left-end-position: ** 24626 * centisome-position: ** 22.85009...") |
(Created page with "Category:gene == Gene SJ20033 == * transcription-direction: ** negative * right-end-position: ** 331597 * left-end-position: ** 323044 * centisome-position: ** 51.933662...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ20033 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 331597 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 323044 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 51.933662 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[FARNESYLTRANSTRANSFERASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[FPPSYN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[GPPSYN-RXN]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** '''8''' reactions found over '''8''' reactions in the full pathway | + | * [[PWY-7492]] |
− | * [[PWY- | + | ** '''1''' reactions found over '''6''' reactions in the full pathway |
− | ** '''6''' reactions found over ''' | + | * [[PWY-6659]] |
− | * [[PWY- | + | ** '''1''' reactions found over '''8''' reactions in the full pathway |
− | ** '''9''' reactions found over ''' | + | * [[PWY-7517]] |
− | * [[PWY- | + | ** '''1''' reactions found over '''7''' reactions in the full pathway |
− | ** ''' | + | * [[PWY-6691]] |
− | {{#set: transcription-direction= | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
− | {{#set: right-end-position= | + | * [[PWY-7721]] |
− | {{#set: left-end-position= | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
− | {{#set: centisome-position= | + | * [[PWY-7736]] |
+ | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5120]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-7720]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6859]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-7102]] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5123]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6383]] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7410]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5122]] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-7141]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-7659]] | ||
+ | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-7709]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-7182]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: right-end-position=331597}} | ||
+ | {{#set: left-end-position=323044}} | ||
+ | {{#set: centisome-position=51.933662 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=18}} |
Revision as of 11:02, 15 January 2021
Contents
Gene SJ20033
- transcription-direction:
- negative
- right-end-position:
- 331597
- left-end-position:
- 323044
- centisome-position:
- 51.933662
Organism(s) associated with this gene
Reaction(s) associated
- FARNESYLTRANSTRANSFERASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- FPPSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GPPSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7492
- 1 reactions found over 6 reactions in the full pathway
- PWY-6659
- 1 reactions found over 8 reactions in the full pathway
- PWY-7517
- 1 reactions found over 7 reactions in the full pathway
- PWY-6691
- 1 reactions found over 3 reactions in the full pathway
- PWY-7721
- 2 reactions found over 4 reactions in the full pathway
- PWY-7736
- 3 reactions found over 8 reactions in the full pathway
- PWY-5120
- 1 reactions found over 1 reactions in the full pathway
- PWY-7720
- 1 reactions found over 3 reactions in the full pathway
- PWY-6859
- 3 reactions found over 4 reactions in the full pathway
- PWY-7102
- 3 reactions found over 6 reactions in the full pathway
- PWY-5123
- 3 reactions found over 3 reactions in the full pathway
- PWY-6383
- 2 reactions found over 5 reactions in the full pathway
- PWY-7410
- 1 reactions found over 4 reactions in the full pathway
- PWY-5122
- 1 reactions found over 1 reactions in the full pathway
- PWY-7141
- 1 reactions found over 2 reactions in the full pathway
- PWY-7659
- 1 reactions found over 9 reactions in the full pathway
- PWY-7709
- 1 reactions found over 2 reactions in the full pathway
- PWY-7182
- 1 reactions found over 2 reactions in the full pathway