Difference between revisions of "SJ07230"

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(Created page with "Category:gene == Gene SJ16448 == * transcription-direction: ** negative * right-end-position: ** 151146 * left-end-position: ** 138531 * centisome-position: ** 49.05732...")
(Created page with "Category:gene == Gene SJ13212 == * transcription-direction: ** negative * right-end-position: ** 95433 * left-end-position: ** 80208 * centisome-position: ** 23.267445...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16448 ==
+
== Gene SJ13212 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 151146
+
** 95433
 
* left-end-position:
 
* left-end-position:
−
** 138531
+
** 80208
 
* centisome-position:
 
* centisome-position:
−
** 49.05732    
+
** 23.267445    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[3.1.1.64-RXN]]
+
* [[3.2.1.109-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
+
* [[3.2.1.52-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[LYSOPHOSPHOLIPASE-RXN]]
+
* [[RXN-12177]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12178]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
+
* [[RXN-12270]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10711]]
+
* [[RXN-14021]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10767]]
+
* [[RXN-16485]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12252]]
+
* [[RXN-16512]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15035]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXNQT-4366]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6303]]
+
* [[PWY-6572]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7646]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6827]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7645]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6857]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7409]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=151146}}
+
{{#set: right-end-position=95433}}
−
{{#set: left-end-position=138531}}
+
{{#set: left-end-position=80208}}
−
{{#set: centisome-position=49.05732   }}
+
{{#set: centisome-position=23.267445   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=10}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Revision as of 11:03, 15 January 2021

Gene SJ13212

  • transcription-direction:
    • negative
  • right-end-position:
    • 95433
  • left-end-position:
    • 80208
  • centisome-position:
    • 23.267445

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6572
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7646
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6827
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7645
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ07230&oldid=106171"