Difference between revisions of "SJ00634"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ13034 == * transcription-direction: ** positive * right-end-position: ** 87930 * left-end-position: ** 82573 * centisome-position: ** 23.792482...") |
(Created page with "Category:gene == Gene SJ07094 == * transcription-direction: ** negative * right-end-position: ** 58777 * left-end-position: ** 27434 * centisome-position: ** 38.563396...") |
||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ07094 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 58777 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 27434 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 38.563396 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[CTPSYN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[GLUTAMIN-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-14325]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7185]] |
| − | ** ''' | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7176]] |
| − | ** '''3''' reactions found over ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7177]] |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[CITRULBIO-PWY]] |
| − | ** '''1''' reactions found over ''' | + | ** '''7''' reactions found over '''8''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[GLUTAMINDEG-PWY]] |
| − | {{#set: right-end-position= | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | {{#set: transcription-direction=negative}} |
| − | {{#set: centisome-position= | + | {{#set: right-end-position=58777}} |
| + | {{#set: left-end-position=27434}} | ||
| + | {{#set: centisome-position=38.563396 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Revision as of 11:06, 15 January 2021
Contents
Gene SJ07094
- transcription-direction:
- negative
- right-end-position:
- 58777
- left-end-position:
- 27434
- centisome-position:
- 38.563396
Organism(s) associated with this gene
Reaction(s) associated
- CTPSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: annotation
- GLUTAMIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14325
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7185
- 5 reactions found over 7 reactions in the full pathway
- PWY-7176
- 3 reactions found over 3 reactions in the full pathway
- PWY-7177
- 3 reactions found over 3 reactions in the full pathway
- CITRULBIO-PWY
- 7 reactions found over 8 reactions in the full pathway
- GLUTAMINDEG-PWY
- 1 reactions found over 1 reactions in the full pathway
