Difference between revisions of "SJ19171"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ06007 == * transcription-direction: ** positive * right-end-position: ** 56361 * left-end-position: ** 52568 * centisome-position: ** 10.883914...")
(Created page with "Category:gene == Gene SJ13098 == * transcription-direction: ** negative * right-end-position: ** 30548 * left-end-position: ** 12458 * centisome-position: ** 3.60364 =...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ06007 ==
+
== Gene SJ13098 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 56361
+
** 30548
 
* left-end-position:
 
* left-end-position:
−
** 52568
+
** 12458
 
* centisome-position:
 
* centisome-position:
−
** 10.883914    
+
** 3.60364    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.3.16-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[RXN-11519]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-11520]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-11521]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12615]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[RXN-7682]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17131]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-901]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17132]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[XANDH]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[XANTHINE-OXIDASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17133]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[XNDH]]
−
{{#set: transcription-direction=positive}}
+
** Category: [[orthology]]
−
{{#set: right-end-position=56361}}
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
{{#set: left-end-position=52568}}
+
</div>
−
{{#set: centisome-position=10.883914   }}
+
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-6632]]
 +
** '''4''' reactions found over '''3''' reactions in the full pathway
 +
* [[P164-PWY]]
 +
** '''6''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-6596]]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[SALVADEHYPOX-PWY]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5497]]
 +
** '''10''' reactions found over '''24''' reactions in the full pathway
 +
* [[PWY-6606]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6607]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6999]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6608]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6538]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5695]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=30548}}
 +
{{#set: left-end-position=12458}}
 +
{{#set: centisome-position=3.60364   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=9}}
 +
{{#set: nb pathway associated=11}}

Revision as of 11:08, 15 January 2021

Gene SJ13098

  • transcription-direction:
    • negative
  • right-end-position:
    • 30548
  • left-end-position:
    • 12458
  • centisome-position:
    • 3.60364

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6632
    • 4 reactions found over 3 reactions in the full pathway
  • P164-PWY
    • 6 reactions found over 17 reactions in the full pathway
  • PWY-6596
    • 7 reactions found over 8 reactions in the full pathway
  • SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5497
    • 10 reactions found over 24 reactions in the full pathway
  • PWY-6606
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6607
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6999
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-6608
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6538
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5695
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19171&oldid=108491"