Difference between revisions of "RXN-16020"

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(Created page with "Category:reaction == Reaction RXN-11855 == * direction: ** left-to-right * common-name: ** rna (cytosine38-c5)-methyltransferase * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction RXN0-5021 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.af ec-2.7.7.af] == Reaction formula == * n Ri...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-11855 ==
+
== Reaction RXN0-5021 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** rna (cytosine38-c5)-methyltransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.1.204 ec-2.1.1.204]
+
** [http://enzyme.expasy.org/EC/2.7.7.af ec-2.7.7.af]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Cytosine-38-in-tRNAs]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[5-Methylcytosine-38-in-tRNAs]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
+
* n [[Ribonucleoside-Triphosphates]][c] '''+''' 1 [[Single-Stranded-DNAs]][c] '''=>''' n-1 [[PPI]][c] '''+''' 1 [[ssDNA-RNA-primer-hybrid]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ00150]]
+
* Gene: [[SJ01693]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21402]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06758]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42957 42957]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00595 R00595]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=rna (cytosine38-c5)-methyltransferase}}
+
{{#set: ec-number=ec-2.7.7.af}}
{{#set: ec-number=ec-2.1.1.204}}
+
{{#set: nb gene associated=3}}
{{#set: nb gene associated=1}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:20, 15 January 2021

Reaction RXN0-5021

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links