Difference between revisions of "6.2.1.34-RXN"
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(Created page with "Category:reaction == Reaction RXN-7954 == * direction: ** left-to-right * common-name: ** [chondroitin]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase * ec-number: *...") |
(Created page with "Category:reaction == Reaction PRPPAMIDOTRANS-RXN == * direction: ** reversible * common-name: ** amidophosphoribosyltransferase ** amidophosphoribosyl transferase * ec-num...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction PRPPAMIDOTRANS-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** amidophosphoribosyltransferase |
+ | ** amidophosphoribosyl transferase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.4.2.14 ec-2.4.2.14] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[5-P-BETA-D-RIBOSYL-AMINE]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PPI]][c] '''<=>''' 1 [[GLN]][c] '''+''' 1 [[PRPP]][c] '''+''' 1 [[WATER]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ04979]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ15928]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
+ | * Gene: [[SJ20754]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: |
− | ** '''2''' reactions found over ''' | + | ** '''6''' reactions found over '''5''' reactions in the full pathway |
+ | * [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7282]], 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis: | ||
+ | ** '''6''' reactions found over '''10''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: common-name= | + | * RHEA: |
− | {{#set: ec-number=ec-2. | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14908 14908] |
− | {{#set: nb gene associated= | + | * LIGAND-RXN: |
− | {{#set: nb pathway associated= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01072 R01072] |
− | {{#set: reconstruction category=annotation}} | + | * UNIPROT: |
− | {{#set: reconstruction tool=pathwaytools}} | + | ** [http://www.uniprot.org/uniprot/P28173 P28173] |
+ | ** [http://www.uniprot.org/uniprot/P35433 P35433] | ||
+ | ** [http://www.uniprot.org/uniprot/Q06203 Q06203] | ||
+ | ** [http://www.uniprot.org/uniprot/O29388 O29388] | ||
+ | ** [http://www.uniprot.org/uniprot/O67236 O67236] | ||
+ | ** [http://www.uniprot.org/uniprot/P65829 P65829] | ||
+ | ** [http://www.uniprot.org/uniprot/O57979 O57979] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9X0X4 Q9X0X4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RXT6 Q9RXT6] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9K0C4 Q9K0C4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9V253 Q9V253] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PIT3 Q9PIT3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q57657 Q57657] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JVC9 Q9JVC9] | ||
+ | ** [http://www.uniprot.org/uniprot/O26742 O26742] | ||
+ | ** [http://www.uniprot.org/uniprot/P43854 P43854] | ||
+ | ** [http://www.uniprot.org/uniprot/P35853 P35853] | ||
+ | ** [http://www.uniprot.org/uniprot/P41390 P41390] | ||
+ | ** [http://www.uniprot.org/uniprot/Q27601 Q27601] | ||
+ | ** [http://www.uniprot.org/uniprot/Q38999 Q38999] | ||
+ | ** [http://www.uniprot.org/uniprot/P04046 P04046] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55621 Q55621] | ||
+ | ** [http://www.uniprot.org/uniprot/Q55038 Q55038] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9STG9 Q9STG9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9T0J5 Q9T0J5] | ||
+ | ** [http://www.uniprot.org/uniprot/P52418 P52418] | ||
+ | ** [http://www.uniprot.org/uniprot/P52419 P52419] | ||
+ | ** [http://www.uniprot.org/uniprot/Q22134 Q22134] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZB05 Q9ZB05] | ||
+ | ** [http://www.uniprot.org/uniprot/P00497 P00497] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AG16 P0AG16] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=amidophosphoribosyltransferase|amidophosphoribosyl transferase}} | ||
+ | {{#set: ec-number=ec-2.4.2.14}} | ||
+ | {{#set: nb gene associated=3}} | ||
+ | {{#set: nb pathway associated=4}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 11:20, 15 January 2021
Contents
Reaction PRPPAMIDOTRANS-RXN
- direction:
- reversible
- common-name:
- amidophosphoribosyltransferase
- amidophosphoribosyl transferase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ04979
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ15928
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ20754
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis:
- 6 reactions found over 5 reactions in the full pathway
- PWY-6121, 5-aminoimidazole ribonucleotide biosynthesis I:
- 5 reactions found over 5 reactions in the full pathway
- PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II:
- 4 reactions found over 5 reactions in the full pathway
- PWY-7282, 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis:
- 6 reactions found over 10 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links