Difference between revisions of "3.1.3.16-RXN"

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(Created page with "Category:reaction == Reaction RXN-1104 == * direction: ** left-to-right * common-name: ** caffeate 3-o-methyltransferase ** caffeate o-methyltransferase * ec-number: ** [h...")
(Created page with "Category:reaction == Reaction RXN-9615 == * direction: ** left-to-right == Reaction formula == * 1 AMMONIUM[e] '''=>''' 1 AMMONIUM[c] == Gene(s) associated with th...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-1104 ==
+
== Reaction RXN-9615 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** caffeate 3-o-methyltransferase
 
−
** caffeate o-methyltransferase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/2.1.1.68 ec-2.1.1.68]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-676]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[FERULIC-ACID]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[AMMONIUM]][e] '''=>''' 1 [[AMMONIUM]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07699]]
+
* Gene: [[SJ20782]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ09797]]
+
* Gene: [[SJ07980]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ17434]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-2181]], free phenylpropanoid acid biosynthesis:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7498]], phenylpropanoids methylation (ice plant):
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7186]], superpathway of scopolin and esculin biosynthesis:
 
−
** '''2''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-1121]], suberin monomers biosynthesis:
 
−
** '''9''' reactions found over '''19''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20226 20226]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28747 28747]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03366 R03366]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q41086 Q41086]
 
−
** [http://www.uniprot.org/uniprot/P28002 P28002]
 
−
** [http://www.uniprot.org/uniprot/Q00763 Q00763]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=caffeate o-methyltransferase|caffeate 3-o-methyltransferase}}
+
{{#set: nb gene associated=2}}
−
{{#set: ec-number=ec-2.1.1.68}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb gene associated=3}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:21, 15 January 2021

Reaction RXN-9615

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links




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