Difference between revisions of "RXN-13426"

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(Created page with "Category:reaction == Reaction RXN-17523 == * direction: ** left-to-right * common-name: ** heme oxygenase * ec-number: ** [http://enzyme.expasy.org/EC/1.14.15.20 ec-1.14.1...")
(Created page with "Category:reaction == Reaction RXN-14797 == * direction: ** left-to-right * common-name: ** trans--2-enoyl-coa hydratase 2 * ec-number: ** [http://enzyme.expasy.org/EC/4.2....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-17523 ==
+
== Reaction RXN-14797 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** heme oxygenase
+
** trans--2-enoyl-coa hydratase 2
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.14.15.20 ec-1.14.15.20]
+
** [http://enzyme.expasy.org/EC/4.2.1.119 ec-4.2.1.119]
 
== Reaction formula ==
 
== Reaction formula ==
* 3 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 8 [[PROTON]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''=>''' 1 [[BILIVERDINE]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[FE+2]][c] '''+''' 6 [[Oxidized-ferredoxins]][c] '''+''' 3 [[WATER]][c]
+
* 1 [[CPD-15685]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-15686]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ20370]]
+
* Gene: [[SJ03584]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ04769]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7578]], phycoviolobilin biosynthesis:
+
* [[PWY-7340]], 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast):
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''10''' reactions in the full pathway
* [[PWY-7170]], phytochromobilin biosynthesis:
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7845]], heme degradation II:
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
* [[PWY-5917]], phycocyanobilin biosynthesis:
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-5915]], phycoerythrobilin biosynthesis I:
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7580]], phycoerythrobilin biosynthesis II:
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7579]], phycourobilin biosynthesis:
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50233 50233]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=heme oxygenase}}
+
{{#set: common-name=trans--2-enoyl-coa hydratase 2}}
{{#set: ec-number=ec-1.14.15.20}}
+
{{#set: ec-number=ec-4.2.1.119}}
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 11:22, 15 January 2021

Reaction RXN-14797

  • direction:
    • left-to-right
  • common-name:
    • trans--2-enoyl-coa hydratase 2
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7340, 9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast):
    • 5 reactions found over 10 reactions in the full pathway

Reconstruction information

External links