Difference between revisions of "LPLPS1AGPE180h"
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(Created page with "Category:reaction == Reaction SUCHMSSELCYSLh == * direction: ** left-to-right * common-name: ** o-succinyl-l-homoserine succinate-lyase (adding cysteine), chloroplast == R...") |
(Created page with "Category:reaction == Reaction NAG1P-URIDYLTRANS-RXN == * direction: ** left-to-right * common-name: ** n-acetylglucosamine-1-phosphate uridyltransferase * ec-number: ** [h...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction NAG1P-URIDYLTRANS-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
− | ** | + | ** n-acetylglucosamine-1-phosphate uridyltransferase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.7.7.23 ec-2.7.7.23] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[N-ACETYL-D-GLUCOSAMINE-1-P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UTP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ16454]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ03148]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY0-1261]], anhydromuropeptides recycling I: | ||
+ | ** '''3''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[UDPNACETYLGALSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis II: | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: | ||
+ | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[UDPNAGSYN-PWY]], UDP-N-acetyl-D-glucosamine biosynthesis I: | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13510 13510] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00416 R00416] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PPA2 Q9PPA2] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JWN3 Q9JWN3] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: common-name= | + | {{#set: common-name=n-acetylglucosamine-1-phosphate uridyltransferase}} |
− | {{#set: nb gene associated= | + | {{#set: ec-number=ec-2.7.7.23}} |
− | {{#set: nb pathway associated= | + | {{#set: nb gene associated=2}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: nb pathway associated=4}} |
− | {{#set: reconstruction tool=pantograph}} | + | {{#set: reconstruction category=annotation|orthology}} |
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 11:22, 15 January 2021
Contents
Reaction NAG1P-URIDYLTRANS-RXN
- direction:
- left-to-right
- common-name:
- n-acetylglucosamine-1-phosphate uridyltransferase
- ec-number:
Reaction formula
- 1 N-ACETYL-D-GLUCOSAMINE-1-P[c] + 1 PROTON[c] + 1 UTP[c] => 1 PPI[c] + 1 UDP-N-ACETYL-D-GLUCOSAMINE[c]
Gene(s) associated with this reaction
- Gene: SJ16454
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ03148
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY0-1261, anhydromuropeptides recycling I:
- 3 reactions found over 12 reactions in the full pathway
- UDPNACETYLGALSYN-PWY, UDP-N-acetyl-D-glucosamine biosynthesis II:
- 3 reactions found over 6 reactions in the full pathway
- PWY-5514, UDP-N-acetyl-D-galactosamine biosynthesis II:
- 5 reactions found over 7 reactions in the full pathway
- UDPNAGSYN-PWY, UDP-N-acetyl-D-glucosamine biosynthesis I:
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links