Difference between revisions of "RXN-22206"
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(Created page with "Category:reaction == Reaction TransportSeed-COB-I-ALAMIN == * direction: ** left-to-right == Reaction formula == * 1.0 COB-I-ALAMIN[e] '''=>''' 1.0 COB-I-ALAMIN[c]...") |
(Created page with "Category:reaction == Reaction RXN0-5055 == * direction: ** left-to-right * common-name: ** acetyl-coa carboxyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.1....") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction RXN0-5055 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
+ | * common-name: | ||
+ | ** acetyl-coa carboxyltransferase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.1.3.d ec-2.1.3.d] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[ACETYL-COA]][c] '''+''' 1 [[carboxybiotin-L-lysine-in-BCCP-dimers]][c] '''=>''' 1 [[MALONYL-COA]][c] '''+''' 1 [[biotin-L-lysine-in-BCCP-dimers]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * Gene: [[SJ14528]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ17987]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[SJ14529]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ06726]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ00484]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | </div> | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-5744]], glyoxylate assimilation: | ||
+ | ** '''4''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-5743]], 3-hydroxypropanoate cycle: | ||
+ | ** '''5''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: | ||
+ | ** '''8''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY0-1264]], biotin-carboxyl carrier protein assembly: | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6722]], candicidin biosynthesis: | ||
+ | ** '''1''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-4381]], fatty acid biosynthesis initiation (bacteria and plants): | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: nb gene associated= | + | {{#set: common-name=acetyl-coa carboxyltransferase}} |
− | {{#set: nb pathway associated= | + | {{#set: ec-number=ec-2.1.3.d}} |
− | {{#set: reconstruction category= | + | {{#set: nb gene associated=5}} |
− | {{#set: reconstruction tool= | + | {{#set: nb pathway associated=6}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 11:23, 15 January 2021
Contents
Reaction RXN0-5055
- direction:
- left-to-right
- common-name:
- acetyl-coa carboxyltransferase
- ec-number:
Reaction formula
- 1 ACETYL-COA[c] + 1 carboxybiotin-L-lysine-in-BCCP-dimers[c] => 1 MALONYL-COA[c] + 1 biotin-L-lysine-in-BCCP-dimers[c]
Gene(s) associated with this reaction
- Gene: SJ14528
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ17987
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ14529
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ06726
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ00484
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5744, glyoxylate assimilation:
- 4 reactions found over 13 reactions in the full pathway
- PWY-5743, 3-hydroxypropanoate cycle:
- 5 reactions found over 13 reactions in the full pathway
- PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
- 8 reactions found over 18 reactions in the full pathway
- PWY0-1264, biotin-carboxyl carrier protein assembly:
- 3 reactions found over 4 reactions in the full pathway
- PWY-6722, candicidin biosynthesis:
- 1 reactions found over 6 reactions in the full pathway
- PWY-4381, fatty acid biosynthesis initiation (bacteria and plants):
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a