Difference between revisions of "RXN-12588"
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(Created page with "Category:reaction == Reaction THFOR2 == * direction: ** left-to-right * common-name: ** 5,6,7,8-tetrahydrofolate:nadp+ oxidoreductase == Reaction formula == * 1.0 CPD-12...") |
(Created page with "Category:reaction == Reaction MEVALONATE-KINASE-RXN == * direction: ** reversible * common-name: ** mevalonate kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.36...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction MEVALONATE-KINASE-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* common-name: | * common-name: | ||
− | ** | + | ** mevalonate kinase |
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.7.1.36 ec-2.7.1.36] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[ATP]][c] '''+''' 1 [[MEVALONATE]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[CPD-499]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ11576]] |
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ09599]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | * [[PWY-7391]], isoprene biosynthesis II (engineered): | ||
+ | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-922]], mevalonate pathway I: | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-6174]], mevalonate pathway II (archaea): | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * RHEA: |
− | {{#set: common-name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17068 17068] |
− | {{#set: nb gene associated= | + | * LIGAND-RXN: |
− | {{#set: nb pathway associated= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02245 R02245] |
− | {{#set: reconstruction category=orthology}} | + | * UNIPROT: |
− | {{#set: reconstruction tool=pantograph}} | + | ** [http://www.uniprot.org/uniprot/P17256 P17256] |
+ | ** [http://www.uniprot.org/uniprot/Q03426 Q03426] | ||
+ | ** [http://www.uniprot.org/uniprot/P07277 P07277] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58487 Q58487] | ||
+ | ** [http://www.uniprot.org/uniprot/P46086 P46086] | ||
+ | ** [http://www.uniprot.org/uniprot/Q09780 Q09780] | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=mevalonate kinase}} | ||
+ | {{#set: ec-number=ec-2.7.1.36}} | ||
+ | {{#set: nb gene associated=2}} | ||
+ | {{#set: nb pathway associated=3}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 11:25, 15 January 2021
Contents
Reaction MEVALONATE-KINASE-RXN
- direction:
- reversible
- common-name:
- mevalonate kinase
- ec-number:
Reaction formula
- 1 ATP[c] + 1 MEVALONATE[c] <=> 1 ADP[c] + 1 CPD-499[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ11576
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ09599
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7391, isoprene biosynthesis II (engineered):
- 7 reactions found over 8 reactions in the full pathway
- PWY-922, mevalonate pathway I:
- 7 reactions found over 7 reactions in the full pathway
- PWY-6174, mevalonate pathway II (archaea):
- 6 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links