Difference between revisions of "SJ09705"

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(Created page with "Category:gene == Gene SJ13518 == * transcription-direction: ** negative * right-end-position: ** 118248 * left-end-position: ** 102501 * centisome-position: ** 30.633984...")
(Created page with "Category:gene == Gene SJ16373 == * transcription-direction: ** positive * right-end-position: ** 222986 * left-end-position: ** 219694 * centisome-position: ** 77.69738...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13518 ==
+
== Gene SJ16373 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 118248
+
** 222986
 
* left-end-position:
 
* left-end-position:
−
** 102501
+
** 219694
 
* centisome-position:
 
* centisome-position:
−
** 30.633984    
+
** 77.69738    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[F16BDEPHOS-RXN]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-12195]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[SUGAR-PHOSPHATASE-RXN]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[P185-PWY]]
+
* [[PWY-6545]]
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY66-399]]
+
* [[PWY-7210]]
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[SUCSYN-PWY]]
+
* [[PWY-7198]]
 
** '''6''' reactions found over '''7''' reactions in the full pathway
 
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[CALVIN-PWY]]
+
* [[PWY-7184]]
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[GLUCONEO-PWY]]
+
{{#set: transcription-direction=positive}}
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
{{#set: right-end-position=222986}}
−
* [[PWY-5484]]
+
{{#set: left-end-position=219694}}
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
{{#set: centisome-position=77.69738   }}
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=118248}}
 
−
{{#set: left-end-position=102501}}
 
−
{{#set: centisome-position=30.633984   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=4}}

Revision as of 08:14, 15 March 2021

Gene SJ16373

  • transcription-direction:
    • positive
  • right-end-position:
    • 222986
  • left-end-position:
    • 219694
  • centisome-position:
    • 77.69738

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09705&oldid=119069"