Difference between revisions of "SJ13208"

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(Created page with "Category:gene == Gene SJ19084 == * transcription-direction: ** positive * right-end-position: ** 13980 * left-end-position: ** 2556 * centisome-position: ** 0.22404996...")
(Created page with "Category:gene == Gene SJ20314 == * transcription-direction: ** negative * right-end-position: ** 552183 * left-end-position: ** 538085 * centisome-position: ** 86.68877...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19084 ==
+
== Gene SJ20314 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 13980
+
** 552183
 
* left-end-position:
 
* left-end-position:
−
** 2556
+
** 538085
 
* centisome-position:
 
* centisome-position:
−
** 0.22404996    
+
** 86.68877    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-15117]]
+
* [[2.4.1.123-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[GLYCOGENIN-GLUCOSYLTRANSFERASE-RXN]]
−
* [[RXN-5467]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-5469]]
+
* [[PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7667]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7817]]
+
* [[PWY-5337]]
−
** '''6''' reactions found over '''16''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
+
* [[PWY-6524]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-6525]]
−
{{#set: right-end-position=13980}}
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
{{#set: left-end-position=2556}}
+
* [[PWY-5067]]
−
{{#set: centisome-position=0.22404996   }}
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=552183}}
 +
{{#set: left-end-position=538085}}
 +
{{#set: centisome-position=86.68877   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}

Revision as of 08:17, 15 March 2021

Gene SJ20314

  • transcription-direction:
    • negative
  • right-end-position:
    • 552183
  • left-end-position:
    • 538085
  • centisome-position:
    • 86.68877

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5337
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6524
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6525
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5067
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ13208&oldid=120641"