Difference between revisions of "SJ17122"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ18316 == * transcription-direction: ** negative * right-end-position: ** 81825 * left-end-position: ** 66220 * centisome-position: ** 10.214344...")
(Created page with "Category:gene == Gene SJ09155 == * transcription-direction: ** positive * right-end-position: ** 48995 * left-end-position: ** 44247 * centisome-position: ** 10.436573...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18316 ==
+
== Gene SJ09155 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 81825
+
** 48995
 
* left-end-position:
 
* left-end-position:
−
** 66220
+
** 44247
 
* centisome-position:
 
* centisome-position:
−
** 10.214344    
+
** 10.436573    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.1.3.16-RXN]]
−
* [[3.1.1.64-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ACYL-COA-HYDROLASE-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=48995}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=44247}}
−
* [[FACOAE18111Z]]
+
{{#set: centisome-position=10.436573   }}
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[FACOAE182]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PALMITOYL-COA-HYDROLASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10708]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10711]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10767]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12252]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-9624]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXNQT-4366]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
* [[PWY-321]]
 
−
** '''3''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-5994]]
 
−
** '''31''' reactions found over '''31''' reactions in the full pathway
 
−
* [[PWY-1121]]
 
−
** '''9''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-6733]]
 
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-735]]
 
−
** '''16''' reactions found over '''19''' reactions in the full pathway
 
−
* [[PWY-6303]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6857]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY3O-355]]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5972]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=81825}}
 
−
{{#set: left-end-position=66220}}
 
−
{{#set: centisome-position=10.214344   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=14}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=9}}
 

Revision as of 08:19, 15 March 2021

Gene SJ09155

  • transcription-direction:
    • positive
  • right-end-position:
    • 48995
  • left-end-position:
    • 44247
  • centisome-position:
    • 10.436573

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ17122&oldid=121373"