Difference between revisions of "SJ09368"

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(Created page with "Category:gene == Gene SJ13095 == * transcription-direction: ** negative * right-end-position: ** 11051 * left-end-position: ** 87 * centisome-position: ** 2.516589500e-2 =...")
(Created page with "Category:gene == Gene SJ03879 == * transcription-direction: ** positive * right-end-position: ** 38277 * left-end-position: ** 32554 * centisome-position: ** 6.2690773...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13095 ==
+
== Gene SJ03879 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 11051
+
** 38277
 
* left-end-position:
 
* left-end-position:
−
** 87
+
** 32554
 
* centisome-position:
 
* centisome-position:
−
** 2.516589500e-2
+
** 6.2690773   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-12615]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.1.1.64-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[AMINOCYL-TRNA-HYDROLASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[CARBOXYLESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10711]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10767]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7682]]
+
* [[RXN-12252]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-901]]
+
* [[RXN-12460]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[XANTHINE-OXIDASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12575]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16637]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXNQT-4366]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6303]]
−
* [[P164-PWY]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''6''' reactions found over '''17''' reactions in the full pathway
+
* [[PWY490-4]]
−
* [[PWY-6596]]
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-6857]]
−
* [[SALVADEHYPOX-PWY]]
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-6308]]
−
* [[PWY-5497]]
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
** '''10''' reactions found over '''24''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-6606]]
+
{{#set: right-end-position=38277}}
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
{{#set: left-end-position=32554}}
−
* [[PWY-6607]]
+
{{#set: centisome-position=6.2690773    }}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6999]]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6608]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6538]]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5695]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=11051}}
 
−
{{#set: left-end-position=87}}
 
−
{{#set: centisome-position=2.516589500e-2}}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=11}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=4}}

Revision as of 08:20, 15 March 2021

Gene SJ03879

  • transcription-direction:
    • positive
  • right-end-position:
    • 38277
  • left-end-position:
    • 32554
  • centisome-position:
    • 6.2690773

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY490-4
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6308
    • 1 reactions found over 3 reactions in the full pathway




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