Difference between revisions of "SJ17264"
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(Created page with "Category:gene == Gene SJ18089 == * transcription-direction: ** negative * right-end-position: ** 250841 * left-end-position: ** 218681 * centisome-position: ** 62.05899...") |
(Created page with "Category:gene == Gene SJ15888 == * transcription-direction: ** positive * right-end-position: ** 92312 * left-end-position: ** 77388 * centisome-position: ** 26.65748...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ15888 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 92312 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 77388 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 26.65748 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[1.5.1.11-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[1.5.1.19-RXN]] |
| − | {{#set: right-end-position= | + | ** Category: [[orthology]] |
| − | {{#set: left-end-position= | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | {{#set: centisome-position= | + | * [[D-OCTOPINE-DEHYDROGENASE-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-7351]] | ||
| + | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[OCTOPINEDEG-PWY]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=92312}} | ||
| + | {{#set: left-end-position=77388}} | ||
| + | {{#set: centisome-position=26.65748 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| + | {{#set: nb pathway associated=2}} | ||
Revision as of 08:20, 15 March 2021
Contents
Gene SJ15888
- transcription-direction:
- positive
- right-end-position:
- 92312
- left-end-position:
- 77388
- centisome-position:
- 26.65748
Organism(s) associated with this gene
Reaction(s) associated
- 1.5.1.11-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 1.5.1.19-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- D-OCTOPINE-DEHYDROGENASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7351
- 1 reactions found over 5 reactions in the full pathway
- OCTOPINEDEG-PWY
- 1 reactions found over 1 reactions in the full pathway
