Difference between revisions of "SJ00076"
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(Created page with "Category:gene == Gene SJ08899 == * transcription-direction: ** positive * right-end-position: ** 12960 * left-end-position: ** 12466 * centisome-position: ** 26.531305...") |
(Created page with "Category:gene == Gene SJ00407 == * transcription-direction: ** positive * right-end-position: ** 36681 * left-end-position: ** 20437 * centisome-position: ** 3.5989377...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ00407 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 36681 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 20437 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 3.5989377 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[1.5.1.20-RXN]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[MTHFO]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[MTHFO_LPAREN_nadp_RPAREN_]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | == Pathway(s) associated == | ||
+ | * [[1CMET2-PWY]] | ||
+ | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-3841]] | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-2201]] | ||
+ | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[CODH-PWY]] | ||
+ | ** '''4''' reactions found over '''10''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=36681}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=20437}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=3.5989377 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=3}} | {{#set: nb reaction associated=3}} | ||
+ | {{#set: nb pathway associated=4}} |
Revision as of 08:21, 15 March 2021
Contents
Gene SJ00407
- transcription-direction:
- positive
- right-end-position:
- 36681
- left-end-position:
- 20437
- centisome-position:
- 3.5989377
Organism(s) associated with this gene
Reaction(s) associated
- 1.5.1.20-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- MTHFO
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- MTHFO_LPAREN_nadp_RPAREN_
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- 1CMET2-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY-3841
- 9 reactions found over 11 reactions in the full pathway
- PWY-2201
- 9 reactions found over 10 reactions in the full pathway
- CODH-PWY
- 4 reactions found over 10 reactions in the full pathway