Difference between revisions of "RXN0-276"
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(Created page with "Category:reaction == Reaction RXN-21833 == * direction: ** left-to-right == Reaction formula == * 1.0 CPD-12860[c] '''=>''' 1.0 CPD-23713[c] == Gene(s) associated...") |
(Created page with "Category:reaction == Reaction AICARSYN-RXN == * direction: ** reversible * common-name: ** 5'-phosphoribosyl-4-(n-succinocarboxamide)-5-aminoimidazole lyase * ec-number: *...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction AICARSYN-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
+ | * common-name: | ||
+ | ** 5'-phosphoribosyl-4-(n-succinocarboxamide)-5-aminoimidazole lyase | ||
+ | * ec-number: | ||
+ | ** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3.2.2] | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''<=>''' 1 [[AICAR]][c] '''+''' 1 [[FUM]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[SJ06544]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-6123]], inosine-5'-phosphate biosynthesis I: |
− | ** ''' | + | ** '''4''' reactions found over '''6''' reactions in the full pathway |
+ | * [[PWY-6124]], inosine-5'-phosphate biosynthesis II: | ||
+ | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7234]], inosine-5'-phosphate biosynthesis III: | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | * METANETX-RXN : MNXR108966 |
− | {{#set: nb gene associated= | + | * RHEA: |
− | {{#set: nb pathway associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23923 23923] |
− | {{#set: reconstruction category= | + | * LIGAND-RXN: |
− | {{#set: reconstruction tool= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R04559 R04559] |
− | {{#set: reconstruction comment= | + | * UNIPROT: |
− | {{#set: reconstruction source= | + | ** [http://www.uniprot.org/uniprot/P21265 P21265] |
+ | ** [http://www.uniprot.org/uniprot/Q58339 Q58339] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AB89 P0AB89] | ||
+ | ** [http://www.uniprot.org/uniprot/O65180 O65180] | ||
+ | ** [http://www.uniprot.org/uniprot/P12047 P12047] | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=5'-phosphoribosyl-4-(n-succinocarboxamide)-5-aminoimidazole lyase}} | ||
+ | {{#set: ec-number=ec-4.3.2.2}} | ||
+ | {{#set: nb gene associated=1}} | ||
+ | {{#set: nb pathway associated=3}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
+ | {{#set: reconstruction comment=n.a}} | ||
+ | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}} |
Revision as of 08:37, 15 March 2021
Contents
Reaction AICARSYN-RXN
- direction:
- reversible
- common-name:
- 5'-phosphoribosyl-4-(n-succinocarboxamide)-5-aminoimidazole lyase
- ec-number:
Reaction formula
- 1 P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE[c] <=> 1 AICAR[c] + 1 FUM[c]
Gene(s) associated with this reaction
- Gene: SJ06544
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6123, inosine-5'-phosphate biosynthesis I:
- 4 reactions found over 6 reactions in the full pathway
- PWY-6124, inosine-5'-phosphate biosynthesis II:
- 5 reactions found over 5 reactions in the full pathway
- PWY-7234, inosine-5'-phosphate biosynthesis III:
- 3 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- METANETX-RXN : MNXR108966
- RHEA:
- LIGAND-RXN:
- UNIPROT: