Difference between revisions of "RXN-16151"

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(Created page with "Category:reaction == Reaction ADENOSYLHOMOCYSTEINASE-RXN == * direction: ** reversible * common-name: ** s-adenosylhomocysteine hydrolase * ec-number: ** [http://enzyme.ex...")
(Created page with "Category:reaction == Reaction RXN-11737 == * direction: ** reversible * common-name: ** cysteate aminotransferase ** l-phenylalanine:2-oxoglutarate aminotransferase * ec-n...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ADENOSYLHOMOCYSTEINASE-RXN ==
+
== Reaction RXN-11737 ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** s-adenosylhomocysteine hydrolase
+
** cysteate aminotransferase
 +
** l-phenylalanine:2-oxoglutarate aminotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.3.1.1 ec-3.3.1.1]
+
** [http://enzyme.expasy.org/EC/2.6.1.1 ec-2.6.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[ADENOSINE]][c] '''+''' 1 [[HOMO-CYS]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-CYSTEATE]][c] '''<=>''' 1 [[CPD-380]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07466]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ04188]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ05778]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ08678]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07646]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 17: Line 30:
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ20943]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[METHIONINE-DEG1-PWY]], L-methionine degradation I (to L-homocysteine):
+
* [[PWY-6643]], coenzyme M biosynthesis II:
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6638]], sulfolactate degradation III:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6642]], (R)-cysteate degradation:
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5041]], S-adenosyl-L-methionine cycle II:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR95161
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21711 21711]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00192 R00192]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02433 R02433]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P10760 P10760]
 
−
** [http://www.uniprot.org/uniprot/P10819 P10819]
 
−
** [http://www.uniprot.org/uniprot/P23526 P23526]
 
−
** [http://www.uniprot.org/uniprot/P28183 P28183]
 
−
** [http://www.uniprot.org/uniprot/P50250 P50250]
 
−
** [http://www.uniprot.org/uniprot/P60176 P60176]
 
−
** [http://www.uniprot.org/uniprot/Q58783 Q58783]
 
−
** [http://www.uniprot.org/uniprot/O23255 O23255]
 
−
** [http://www.uniprot.org/uniprot/O27673 O27673]
 
−
** [http://www.uniprot.org/uniprot/O29376 O29376]
 
−
** [http://www.uniprot.org/uniprot/O28279 O28279]
 
−
** [http://www.uniprot.org/uniprot/P51893 P51893]
 
−
** [http://www.uniprot.org/uniprot/P50245 P50245]
 
−
** [http://www.uniprot.org/uniprot/P26799 P26799]
 
−
** [http://www.uniprot.org/uniprot/P35007 P35007]
 
−
** [http://www.uniprot.org/uniprot/P39954 P39954]
 
−
** [http://www.uniprot.org/uniprot/P50252 P50252]
 
−
** [http://www.uniprot.org/uniprot/P50249 P50249]
 
−
** [http://www.uniprot.org/uniprot/P74008 P74008]
 
−
** [http://www.uniprot.org/uniprot/P32112 P32112]
 
−
** [http://www.uniprot.org/uniprot/Q9UG84 Q9UG84]
 
−
** [http://www.uniprot.org/uniprot/Q01781 Q01781]
 
−
** [http://www.uniprot.org/uniprot/P27604 P27604]
 
−
</div>
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=s-adenosylhomocysteine hydrolase}}
+
{{#set: common-name=cysteate aminotransferase|l-phenylalanine:2-oxoglutarate aminotransferase}}
−
{{#set: ec-number=ec-3.3.1.1}}
+
{{#set: ec-number=ec-2.6.1.1}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 08:38, 15 March 2021

Reaction RXN-11737

  • direction:
    • reversible
  • common-name:
    • cysteate aminotransferase
    • l-phenylalanine:2-oxoglutarate aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6643, coenzyme M biosynthesis II:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6638, sulfolactate degradation III:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6642, (R)-cysteate degradation:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95161
  • LIGAND-RXN:





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