Difference between revisions of "HYDROG-RXN"
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(Created page with "Category:reaction == Reaction RXN-4733 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1 ec-2.4.1] == Reaction formula == * 1 CPD-12575...") |
(Created page with "Category:reaction == Reaction HYDROG-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.12.7.2 ec-1.12.7.2] == Reaction formula == * 1 HYDR...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction HYDROG-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.12.7.2 ec-1.12.7.2] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[HYDROGEN-MOLECULE]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''<=>''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ19006]] |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ04494]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ18864]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-6785]], hydrogen production VIII: |
− | ** '''1''' reactions found over '''7''' reactions in the full pathway | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
+ | * [[PWY-6780]], hydrogen production VI: | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6759]], hydrogen production III: | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[GLUDEG-II-PWY]], L-glutamate degradation VII (to butanoate): | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * METANETX-RXN : MNXR100757 | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17448 17448] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00019 R00019] |
− | * | + | * UNIPROT: |
− | {{#set: direction= | + | ** [http://www.uniprot.org/uniprot/P27648 P27648] |
− | {{#set: ec-number=ec- | + | ** [http://www.uniprot.org/uniprot/P31892 P31892] |
− | {{#set: nb gene associated= | + | ** [http://www.uniprot.org/uniprot/O25350 O25350] |
− | {{#set: nb pathway associated= | + | ** [http://www.uniprot.org/uniprot/O67092 O67092] |
+ | ** [http://www.uniprot.org/uniprot/P31891 P31891] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AAJ8 P0AAJ8] | ||
+ | ** [http://www.uniprot.org/uniprot/O66894 O66894] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AAM1 P0AAM1] | ||
+ | ** [http://www.uniprot.org/uniprot/P31898 P31898] | ||
+ | ** [http://www.uniprot.org/uniprot/P0ACE0 P0ACE0] | ||
+ | ** [http://www.uniprot.org/uniprot/O28891 O28891] | ||
+ | ** [http://www.uniprot.org/uniprot/O66895 O66895] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9ZLK4 Q9ZLK4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9WY44 Q9WY44] | ||
+ | ** [http://www.uniprot.org/uniprot/Q46508 Q46508] | ||
+ | ** [http://www.uniprot.org/uniprot/O66896 O66896] | ||
+ | ** [http://www.uniprot.org/uniprot/O67095 O67095] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PN32 Q9PN32] | ||
+ | ** [http://www.uniprot.org/uniprot/P13061 P13061] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UYN3 Q9UYN3] | ||
+ | ** [http://www.uniprot.org/uniprot/P16429 P16429] | ||
+ | ** [http://www.uniprot.org/uniprot/O52683 O52683] | ||
+ | ** [http://www.uniprot.org/uniprot/P13066 P13066] | ||
+ | ** [http://www.uniprot.org/uniprot/O25349 O25349] | ||
+ | ** [http://www.uniprot.org/uniprot/P0AAK1 P0AAK1] | ||
+ | ** [http://www.uniprot.org/uniprot/P29166 P29166] | ||
+ | ** [http://www.uniprot.org/uniprot/P07603 P07603] | ||
+ | ** [http://www.uniprot.org/uniprot/P13628 P13628] | ||
+ | ** [http://www.uniprot.org/uniprot/P0ACD8 P0ACD8] | ||
+ | ** [http://www.uniprot.org/uniprot/P69739 P69739] | ||
+ | ** [http://www.uniprot.org/uniprot/P12636 P12636] | ||
+ | ** [http://www.uniprot.org/uniprot/P12635 P12635] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59262 Q59262] | ||
+ | ** [http://www.uniprot.org/uniprot/P33375 P33375] | ||
+ | ** [http://www.uniprot.org/uniprot/P33374 P33374] | ||
+ | ** [http://www.uniprot.org/uniprot/P21950 P21950] | ||
+ | ** [http://www.uniprot.org/uniprot/P21949 P21949] | ||
+ | ** [http://www.uniprot.org/uniprot/P23000 P23000] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M121 Q7M121] | ||
+ | ** [http://www.uniprot.org/uniprot/P15283 P15283] | ||
+ | ** [http://www.uniprot.org/uniprot/P15284 P15284] | ||
+ | ** [http://www.uniprot.org/uniprot/P16430 P16430] | ||
+ | ** [http://www.uniprot.org/uniprot/P16431 P16431] | ||
+ | ** [http://www.uniprot.org/uniprot/P16432 P16432] | ||
+ | ** [http://www.uniprot.org/uniprot/P16433 P16433] | ||
+ | ** [http://www.uniprot.org/uniprot/P17633 P17633] | ||
+ | ** [http://www.uniprot.org/uniprot/P17632 P17632] | ||
+ | ** [http://www.uniprot.org/uniprot/P18191 P18191] | ||
+ | ** [http://www.uniprot.org/uniprot/P18637 P18637] | ||
+ | ** [http://www.uniprot.org/uniprot/P18636 P18636] | ||
+ | ** [http://www.uniprot.org/uniprot/Q46606 Q46606] | ||
+ | ** [http://www.uniprot.org/uniprot/P31875 P31875] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M0Y1 Q7M0Y1] | ||
+ | ** [http://www.uniprot.org/uniprot/Q7M0Y0 Q7M0Y0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9S8S0 Q9S8S0] | ||
+ | ** [http://www.uniprot.org/uniprot/P31883 P31883] | ||
+ | ** [http://www.uniprot.org/uniprot/P21960 P21960] | ||
+ | ** [http://www.uniprot.org/uniprot/Q43953 Q43953] | ||
+ | ** [http://www.uniprot.org/uniprot/O96948 O96948] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: ec-number=ec-1.12.7.2}} | ||
+ | {{#set: nb gene associated=3}} | ||
+ | {{#set: nb pathway associated=5}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus}} |
Latest revision as of 11:20, 18 March 2021
Contents
Reaction HYDROG-RXN
- direction:
- reversible
- ec-number:
Reaction formula
- 1 HYDROGEN-MOLECULE[c] + 2 Oxidized-ferredoxins[c] <=> 2 PROTON[c] + 2 Reduced-ferredoxins[c]
Gene(s) associated with this reaction
- Gene: SJ19006
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ04494
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ18864
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- PWY-6785, hydrogen production VIII:
- 1 reactions found over 1 reactions in the full pathway
- PWY-6780, hydrogen production VI:
- 1 reactions found over 2 reactions in the full pathway
- PWY-6759, hydrogen production III:
- 1 reactions found over 1 reactions in the full pathway
- GLUDEG-II-PWY, L-glutamate degradation VII (to butanoate):
- 3 reactions found over 3 reactions in the full pathway
- PWY4LZ-257, superpathway of fermentation (Chlamydomonas reinhardtii):
- 7 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- METANETX-RXN : MNXR100757
- RHEA:
- LIGAND-RXN:
- UNIPROT:
- P27648
- P31892
- O25350
- O67092
- P31891
- P0AAJ8
- O66894
- P0AAM1
- P31898
- P0ACE0
- O28891
- O66895
- Q9ZLK4
- Q9WY44
- Q46508
- O66896
- O67095
- Q9PN32
- P13061
- Q9UYN3
- P16429
- O52683
- P13066
- O25349
- P0AAK1
- P29166
- P07603
- P13628
- P0ACD8
- P69739
- P12636
- P12635
- Q59262
- P33375
- P33374
- P21950
- P21949
- P23000
- Q7M121
- P15283
- P15284
- P16430
- P16431
- P16432
- P16433
- P17633
- P17632
- P18191
- P18637
- P18636
- Q46606
- P31875
- Q7M0Y1
- Q7M0Y0
- Q9S8S0
- P31883
- P21960
- Q43953
- O96948