Difference between revisions of "SJ12222"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14278 CPD-14278] == * common-name: ** (3r)-3-hydroxy-cerotoyl-coa * smiles: ** cccccccccccc...")
 
(Created page with "Category:gene == Gene SJ18134 == * transcription-direction: ** positive * right-end-position: ** 128758 * left-end-position: ** 106108 * centisome-position: ** 42.135777...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14278 CPD-14278] ==
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== Gene SJ18134 ==
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* common-name:
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* transcription-direction:
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** (3r)-3-hydroxy-cerotoyl-coa
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** positive
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* smiles:
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* right-end-position:
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** cccccccccccccccccccccccc(o)cc(=o)sccnc(=o)ccnc(c(o)c(c)(c)cop([o-])(=o)op([o-])(=o)occ1(c(op(=o)([o-])[o-])c(o)c(o1)n3(c=nc2(c(n)=nc=nc=23))))=o
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** 128758
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* inchi-key:
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* left-end-position:
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** gbmjotouuwgtia-cslactsssa-j
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** 106108
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* molecular-weight:
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* centisome-position:
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** 1158.182
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** 42.135777   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-13305]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-13301]]
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* [[DIHYDROOROTATE-DEHYDROGENASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=(3r)-3-hydroxy-cerotoyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=gbmjotouuwgtia-cslactsssa-j}}
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** Category: [[orthology]]
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{{#set: molecular-weight=1158.182}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN0-6491]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN0-6554]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-5686]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=128758}}
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{{#set: left-end-position=106108}}
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{{#set: centisome-position=42.135777    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=1}}

Revision as of 14:20, 26 August 2019

Gene SJ18134

  • transcription-direction:
    • positive
  • right-end-position:
    • 128758
  • left-end-position:
    • 106108
  • centisome-position:
    • 42.135777

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5686
    • 6 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ12222&oldid=16288"