Difference between revisions of "SJ15619"

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(Created page with "Category:gene == Gene SJ12893 == * transcription-direction: ** negative * right-end-position: ** 148103 * left-end-position: ** 139625 * centisome-position: ** 39.896732...")
 
(Created page with "Category:gene == Gene SJ06638 == * transcription-direction: ** positive * right-end-position: ** 70959 * left-end-position: ** 47038 * centisome-position: ** 61.245007...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ12893 ==
+
== Gene SJ06638 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 148103
+
** 70959
 
* left-end-position:
 
* left-end-position:
** 139625
+
** 47038
 
* centisome-position:
 
* centisome-position:
** 39.896732    
+
** 61.245007    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[DUTNH]]
+
* [[3.2.1.39-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[DUTP-PYROP-RXN]]
+
* [[3.2.1.6-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
== Pathway(s) associated ==
+
** Category: [[orthology]]
* [[PWY-7187]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
** '''6''' reactions found over '''7''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
* [[PWY0-166]]
+
{{#set: right-end-position=70959}}
** '''14''' reactions found over '''13''' reactions in the full pathway
+
{{#set: left-end-position=47038}}
* [[PWY-7206]]
+
{{#set: centisome-position=61.245007   }}
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7184]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=148103}}
 
{{#set: left-end-position=139625}}
 
{{#set: centisome-position=39.896732   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=5}}
 

Revision as of 14:20, 26 August 2019

Gene SJ06638

  • transcription-direction:
    • positive
  • right-end-position:
    • 70959
  • left-end-position:
    • 47038
  • centisome-position:
    • 61.245007

Organism(s) associated with this gene

Reaction(s) associated