Difference between revisions of "SJ10037"

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(Created page with "Category:gene == Gene SJ16880 == * transcription-direction: ** positive * right-end-position: ** 225817 * left-end-position: ** 220235 * centisome-position: ** 79.88096...")
 
(Created page with "Category:gene == Gene SJ13977 == * transcription-direction: ** negative * right-end-position: ** 690637 * left-end-position: ** 684443 * centisome-position: ** 94.26616...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16880 ==
+
== Gene SJ13977 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 225817
+
** 690637
 
* left-end-position:
 
* left-end-position:
−
** 220235
+
** 684443
 
* centisome-position:
 
* centisome-position:
−
** 79.88096    
+
** 94.26616    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[SUPEROX-DISMUT-RXN]]
−
* [[GSHTRAN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[GST-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13673]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15680]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6842]]
+
* [[DETOX1-PWY]]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-4061]]
+
* [[DETOX1-PWY-1]]
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY66-374]]
+
* [[PWY-6854]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7112]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=690637}}
−
* [[PWY-7533]]
+
{{#set: left-end-position=684443}}
−
** '''3''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=94.26616   }}
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=225817}}
 
−
{{#set: left-end-position=220235}}
 
−
{{#set: centisome-position=79.88096   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=3}}

Revision as of 14:21, 26 August 2019

Gene SJ13977

  • transcription-direction:
    • negative
  • right-end-position:
    • 690637
  • left-end-position:
    • 684443
  • centisome-position:
    • 94.26616

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • DETOX1-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • DETOX1-PWY-1
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6854
    • 2 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10037&oldid=16864"