Difference between revisions of "SJ00080"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ06699 == * transcription-direction: ** positive * right-end-position: ** 148980 * left-end-position: ** 134092 * centisome-position: ** 14.426639...") |
(Created page with "Category:gene == Gene SJ14890 == * transcription-direction: ** negative * right-end-position: ** 57545 * left-end-position: ** 34340 * centisome-position: ** 11.219545...") |
||
| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ14890 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 57545 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 34340 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 11.219545 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[SERINE-O-ACETTRAN-RXN]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7870]] |
| − | ** ''' | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-7274]] |
| − | {{#set: right-end-position= | + | ** '''1''' reactions found over '''6''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[CYSTSYN-PWY]] |
| − | {{#set: centisome-position= | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| + | * [[PWY-6936]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=57545}} | ||
| + | {{#set: left-end-position=34340}} | ||
| + | {{#set: centisome-position=11.219545 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Revision as of 14:21, 26 August 2019
Contents
Gene SJ14890
- transcription-direction:
- negative
- right-end-position:
- 57545
- left-end-position:
- 34340
- centisome-position:
- 11.219545
Organism(s) associated with this gene
Reaction(s) associated
- SERINE-O-ACETTRAN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7870
- 2 reactions found over 4 reactions in the full pathway
- PWY-7274
- 1 reactions found over 6 reactions in the full pathway
- CYSTSYN-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY-6936
- 5 reactions found over 5 reactions in the full pathway
