Difference between revisions of "SJ12377"
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(Created page with "Category:gene == Gene SJ16948 == * transcription-direction: ** positive * right-end-position: ** 497917 * left-end-position: ** 491483 * centisome-position: ** 72.06464...") |
(Created page with "Category:gene == Gene SJ07132 == * transcription-direction: ** negative * right-end-position: ** 84492 * left-end-position: ** 77822 * centisome-position: ** 16.760279...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ07132 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 84492 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 77822 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 16.760279 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| + | * [[6.3.4.10-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[6.3.4.11-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[6.3.4.9-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[BIOTINLIG-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-13037]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[RXN0-7192]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN0-947]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[PWY0-1264]] |
| − | ** '''4''' reactions found over '''4''' reactions in the full pathway | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-6987]] |
| − | {{#set: right-end-position= | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-7382]] |
| − | {{#set: centisome-position= | + | ** '''4''' reactions found over '''7''' reactions in the full pathway |
| + | * [[PWY0-501]] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=84492}} | ||
| + | {{#set: left-end-position=77822}} | ||
| + | {{#set: centisome-position=16.760279 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=7}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Revision as of 14:21, 26 August 2019
Contents
Gene SJ07132
- transcription-direction:
- negative
- right-end-position:
- 84492
- left-end-position:
- 77822
- centisome-position:
- 16.760279
Organism(s) associated with this gene
Reaction(s) associated
- 6.3.4.10-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- 6.3.4.11-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- 6.3.4.9-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- BIOTINLIG-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-13037
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-7192
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN0-947
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY0-1264
- 3 reactions found over 4 reactions in the full pathway
- PWY-6987
- 2 reactions found over 3 reactions in the full pathway
- PWY-7382
- 4 reactions found over 7 reactions in the full pathway
- PWY0-501
- 2 reactions found over 2 reactions in the full pathway
