Difference between revisions of "SJ20001"
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(Created page with "Category:gene == Gene SJ04717 == * transcription-direction: ** positive * right-end-position: ** 133911 * left-end-position: ** 126274 * centisome-position: ** 24.949419...") |
(Created page with "Category:gene == Gene SJ18200 == * transcription-direction: ** negative * right-end-position: ** 249623 * left-end-position: ** 215052 * centisome-position: ** 85.64533...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ18200 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 249623 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 215052 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 85.64533 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[PHEAMINOTRANS-RXN]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[SUCCINYLDIAMINOPIMTRANS-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[ANAPHENOXI-PWY]] |
| − | ** ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PHESYN]] |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-7432]] |
| − | {{#set: right-end-position= | + | ** '''3''' reactions found over '''2''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-5079]] |
| − | {{#set: centisome-position= | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| + | * [[DAPLYSINESYN-PWY]] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=249623}} | ||
| + | {{#set: left-end-position=215052}} | ||
| + | {{#set: centisome-position=85.64533 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=2}} | {{#set: nb reaction associated=2}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Revision as of 14:22, 26 August 2019
Contents
Gene SJ18200
- transcription-direction:
- negative
- right-end-position:
- 249623
- left-end-position:
- 215052
- centisome-position:
- 85.64533
Organism(s) associated with this gene
Reaction(s) associated
- PHEAMINOTRANS-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- Category: orthology
- SUCCINYLDIAMINOPIMTRANS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- ANAPHENOXI-PWY
- 1 reactions found over 3 reactions in the full pathway
- PHESYN
- 3 reactions found over 3 reactions in the full pathway
- PWY-7432
- 3 reactions found over 2 reactions in the full pathway
- PWY-5079
- 2 reactions found over 4 reactions in the full pathway
- DAPLYSINESYN-PWY
- 7 reactions found over 9 reactions in the full pathway
