Difference between revisions of "SJ11154"
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(Created page with "Category:gene == Gene SJ17481 == * transcription-direction: ** negative * right-end-position: ** 23718 * left-end-position: ** 8447 * centisome-position: ** 3.2271497...") |
(Created page with "Category:gene == Gene SJ14363 == * transcription-direction: ** positive * right-end-position: ** 598282 * left-end-position: ** 584535 * centisome-position: ** 81.51157...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ14363 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 598282 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 584535 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 81.51157 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[2.4.1.151-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | |||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[2.4.1.223-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-14841]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7434]] |
| − | ** | + | ** '''5''' reactions found over '''8''' reactions in the full pathway |
| − | + | * [[PWY-6558]] | |
| − | + | ** '''7''' reactions found over '''13''' reactions in the full pathway | |
| − | * [[PWY- | + | {{#set: transcription-direction=positive}} |
| − | + | {{#set: right-end-position=598282}} | |
| − | + | {{#set: left-end-position=584535}} | |
| − | + | {{#set: centisome-position=81.51157 }} | |
| − | |||
| − | ** ''' | ||
| − | {{#set: transcription-direction= | ||
| − | {{#set: right-end-position= | ||
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
Revision as of 14:22, 26 August 2019
Contents
Gene SJ14363
- transcription-direction:
- positive
- right-end-position:
- 598282
- left-end-position:
- 584535
- centisome-position:
- 81.51157
Organism(s) associated with this gene
Reaction(s) associated
- 2.4.1.151-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- 2.4.1.223-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14841
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7434
- 5 reactions found over 8 reactions in the full pathway
- PWY-6558
- 7 reactions found over 13 reactions in the full pathway
