Difference between revisions of "SJ00762"
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(Created page with "Category:gene == Gene SJ07699 == * transcription-direction: ** positive * right-end-position: ** 36626 * left-end-position: ** 30440 * centisome-position: ** 48.318993...") |
(Created page with "Category:gene == Gene SJ14627 == * transcription-direction: ** positive * right-end-position: ** 134363 * left-end-position: ** 129662 * centisome-position: ** 41.629852...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ14627 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 134363 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 129662 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 41.629852 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[3.1.3.16-RXN]] |
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN | + | * [[4-NITROPHENYLPHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[PGPPHOSPHA-RXN]] |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | * [[RXN- | + | * [[PHOSPHATIDYLINOSITOL-BISPHOSPHATASE-RXN]] |
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[PROTEIN-TYROSINE-PHOSPHATASE-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-13313]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[ | + | * [[PWY4FS-7]] |
− | ** ''' | + | ** '''3''' reactions found over '''2''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-7817]] |
− | + | ** '''6''' reactions found over '''16''' reactions in the full pathway | |
− | + | * [[PWY0-1545]] | |
− | ** ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
− | * [[ | + | * [[PWY-5269]] |
− | ** '''2''' reactions found over ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-5668]] |
− | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY4FS-8]] |
− | ** ''' | + | ** '''3''' reactions found over '''2''' reactions in the full pathway |
− | * [[ | + | * [[PWY-6368]] |
− | ** ''' | + | ** '''6''' reactions found over '''9''' reactions in the full pathway |
− | |||
− | |||
− | * [[PWY- | ||
− | ** ''' | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=134363}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=129662}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=41.629852 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=6}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=7}} |
Revision as of 14:22, 26 August 2019
Contents
Gene SJ14627
- transcription-direction:
- positive
- right-end-position:
- 134363
- left-end-position:
- 129662
- centisome-position:
- 41.629852
Organism(s) associated with this gene
Reaction(s) associated
- 3.1.3.16-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 4-NITROPHENYLPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PGPPHOSPHA-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PHOSPHATIDYLINOSITOL-BISPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PROTEIN-TYROSINE-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13313
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY4FS-7
- 3 reactions found over 2 reactions in the full pathway
- PWY-7817
- 6 reactions found over 16 reactions in the full pathway
- PWY0-1545
- 2 reactions found over 3 reactions in the full pathway
- PWY-5269
- 3 reactions found over 3 reactions in the full pathway
- PWY-5668
- 3 reactions found over 3 reactions in the full pathway
- PWY4FS-8
- 3 reactions found over 2 reactions in the full pathway
- PWY-6368
- 6 reactions found over 9 reactions in the full pathway