Difference between revisions of "CPD-11412"
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(Created page with "Category:gene == Gene SJ08036 == * transcription-direction: ** positive * right-end-position: ** 147245 * left-end-position: ** 102991 * centisome-position: ** 23.121443...") |
(Created page with "Category:gene == Gene SJ20354 == * transcription-direction: ** positive * right-end-position: ** 184427 * left-end-position: ** 168482 * centisome-position: ** 80.684814...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ20354 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 184427 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 168482 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 80.684814 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * [[ | + | * [[3.2.1.106-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** source: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | * [[ | + | * [[MALTODEXGLUCOSID-RXN]] |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | * [[ | + | * [[RXN-14281]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-14282]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-14283]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN- | + | * [[RXN-15910]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN0- | + | * [[RXN0-5183]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
</div> | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-7918]] |
− | ** ''' | + | ** '''1''' reactions found over '''4''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-7919]] |
− | ** ''' | + | ** '''1''' reactions found over '''20''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-842]] |
− | ** ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
− | * [[ | + | * [[GLYCOCAT-PWY]] |
− | + | ** '''6''' reactions found over '''8''' reactions in the full pathway | |
− | |||
− | ** '''6''' reactions found over | ||
− | |||
− | |||
− | |||
− | |||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=184427}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=168482}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=80.684814 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=7}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Revision as of 14:23, 26 August 2019
Contents
Gene SJ20354
- transcription-direction:
- positive
- right-end-position:
- 184427
- left-end-position:
- 168482
- centisome-position:
- 80.684814
Organism(s) associated with this gene
Reaction(s) associated
- 3.2.1.106-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- MALTODEXGLUCOSID-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14281
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14282
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14283
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15910
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5183
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7918
- 1 reactions found over 4 reactions in the full pathway
- PWY-7919
- 1 reactions found over 20 reactions in the full pathway
- PWY-842
- 1 reactions found over 3 reactions in the full pathway
- GLYCOCAT-PWY
- 6 reactions found over 8 reactions in the full pathway