Difference between revisions of "CPD-1301"

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(Created page with "Category:gene == Gene SJ10794 == * transcription-direction: ** positive * right-end-position: ** 314960 * left-end-position: ** 295807 * centisome-position: ** 77.13089...")
 
(Created page with "Category:gene == Gene SJ08861 == * transcription-direction: ** negative * right-end-position: ** 13432 * left-end-position: ** 12836 * centisome-position: ** 26.734983...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10794 ==
+
== Gene SJ08861 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 314960
+
** 13432
 
* left-end-position:
 
* left-end-position:
−
** 295807
+
** 12836
 
* centisome-position:
 
* centisome-position:
−
** 77.13089    
+
** 26.734983    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HOMOCYSMET-RXN]]
+
* [[3.1.26.4-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[DNA-DIRECTED-DNA-POLYMERASE-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12730]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
== Pathway(s) associated ==
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PWY-5041]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=13432}}
−
* [[HSERMETANA-PWY]]
+
{{#set: left-end-position=12836}}
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
{{#set: centisome-position=26.734983   }}
−
* [[HOMOSER-METSYN-PWY]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6151]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-702]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6936]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=314960}}
 
−
{{#set: left-end-position=295807}}
 
−
{{#set: centisome-position=77.13089   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=6}}
 

Revision as of 14:23, 26 August 2019

Gene SJ08861

  • transcription-direction:
    • negative
  • right-end-position:
    • 13432
  • left-end-position:
    • 12836
  • centisome-position:
    • 26.734983

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-1301&oldid=20144"