Difference between revisions of "CPD-694"

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(Created page with "Category:gene == Gene SJ22175 == * transcription-direction: ** positive * right-end-position: ** 113295 * left-end-position: ** 106400 * centisome-position: ** 59.18641...")
 
(Created page with "Category:gene == Gene SJ05621 == * transcription-direction: ** negative * right-end-position: ** 75496 * left-end-position: ** 65227 * centisome-position: ** 13.2123785...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ22175 ==
+
== Gene SJ05621 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 113295
+
** 75496
 
* left-end-position:
 
* left-end-position:
** 106400
+
** 65227
 
* centisome-position:
 
* centisome-position:
** 59.18641    
+
** 13.2123785    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[CARBODEHYDRAT-RXN]]
+
* [[6.3.5.6-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[6.3.5.7-RXN]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN0-5224]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-6142]]
+
* [[PWY490-4]]
** '''10''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
* [[PWY-7115]]
+
* [[PWY-5921]]
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
* [[PWYQT-4429]]
+
{{#set: transcription-direction=negative}}
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: right-end-position=75496}}
* [[CYANCAT-PWY]]
+
{{#set: left-end-position=65227}}
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: centisome-position=13.2123785   }}
* [[PWY-5744]]
 
** '''4''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-5789]]
 
** '''8''' reactions found over '''18''' reactions in the full pathway
 
* [[PWY-7117]]
 
** '''10''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-5743]]
 
** '''5''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-241]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=113295}}
 
{{#set: left-end-position=106400}}
 
{{#set: centisome-position=59.18641   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=2}}

Revision as of 14:24, 26 August 2019

Gene SJ05621

  • transcription-direction:
    • negative
  • right-end-position:
    • 75496
  • left-end-position:
    • 65227
  • centisome-position:
    • 13.2123785

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY490-4
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5921
    • 2 reactions found over 4 reactions in the full pathway