Difference between revisions of "CPD-17400"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.51-RXN 1.1.1.51-RXN] == * direction: ** left-to-right * common-name: ** testosterone dehydrog...")
 
(Created page with "Category:gene == Gene SJ21480 == * transcription-direction: ** positive * right-end-position: ** 137840 * left-end-position: ** 107097 * centisome-position: ** 55.81137...")
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.51-RXN 1.1.1.51-RXN] ==
+
== Gene SJ21480 ==
−
* direction:
+
* transcription-direction:
−
** left-to-right
+
** positive
−
* common-name:
+
* right-end-position:
−
** testosterone dehydrogenase [nad(p)]
+
** 137840
−
* ec-number:
+
* left-end-position:
−
** [http://enzyme.expasy.org/EC/1.1.1.51 ec-1.1.1.51]
+
** 107097
−
== Reaction formula ==
+
* centisome-position:
−
* 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[TESTOSTERONE]][c] '''=>''' 1 [[ANDROST4ENE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
+
** 55.81137   
−
== Gene(s) associated with this reaction  ==
+
== Organism(s) associated with this gene  ==
−
* Gene: [[SJ01444]]
+
* [[S.japonica_carotenoid_curated]]
 +
== Reaction(s) associated ==
 +
* [[3.1.3.46-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
== Pathway(s)  ==
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
* [[PWY-6943]], testosterone and androsterone degradation to androstendione: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6943 PWY-6943]
+
** Category: [[annotation]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
== Reconstruction information  ==
+
* [[6-PHOSPHOFRUCTO-2-KINASE-RXN]]
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
** Category: [[annotation]]
−
== External links  ==
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* RHEA:
+
** Category: [[orthology]]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14930 14930]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* UNIPROT:
+
* [[SUGAR-PHOSPHATASE-RXN]]
−
** [http://www.uniprot.org/uniprot/Q7LZT0 Q7LZT0]
+
** Category: [[annotation]]
−
** [http://www.uniprot.org/uniprot/P19871 P19871]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: direction=left-to-right}}
+
== Pathway(s) associated ==
−
{{#set: common-name=testosterone dehydrogenase [nad(p)]}}
+
* [[PWY66-423]]
−
{{#set: ec-number=ec-1.1.1.51}}
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
{{#set: nb gene associated=1}}
+
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=137840}}
 +
{{#set: left-end-position=107097}}
 +
{{#set: centisome-position=55.81137    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 14:24, 26 August 2019

Gene SJ21480

  • transcription-direction:
    • positive
  • right-end-position:
    • 137840
  • left-end-position:
    • 107097
  • centisome-position:
    • 55.81137

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-423
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD-17400&oldid=21107"