Difference between revisions of "CPD-13084"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMEPIM-RXN DIAMINOPIMEPIM-RXN] == * direction: ** reversible * ec-number: ** [http://enzyme...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-DIPHOSPHATASE-RXN GUANOSINE-DIPHOSPHATASE-RXN] == * direction: ** left-to-right * common-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMEPIM-RXN DIAMINOPIMEPIM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-DIPHOSPHATASE-RXN GUANOSINE-DIPHOSPHATASE-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** guanosine-diphosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.1.1.7 ec-5.1.1.7]
+
** [http://enzyme.expasy.org/EC/3.6.1.42 ec-3.6.1.42]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[LL-DIAMINOPIMELATE]][c] '''<=>''' 1 [[MESO-DIAMINOPIMELATE]][c]
+
* 1 [[GDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ00842]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16444]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15396 15396]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22157 22157]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02735 R02735]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00328 R00328]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PMD8 Q9PMD8]
+
** [http://www.uniprot.org/uniprot/P32621 P32621]
−
** [http://www.uniprot.org/uniprot/Q9JV69 Q9JV69]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P44859 P44859]
+
{{#set: common-name=guanosine-diphosphatase}}
−
** [http://www.uniprot.org/uniprot/Q58519 Q58519]
+
{{#set: ec-number=ec-3.6.1.42}}
−
** [http://www.uniprot.org/uniprot/P0A6K1 P0A6K1]
+
{{#set: nb gene associated=2}}
−
** [http://www.uniprot.org/uniprot/Q51564 Q51564]
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P46814 P46814]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/O05322 O05322]
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: ec-number=ec-5.1.1.7}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
−
{{#set: nb gene associated=0}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=gap-filling}}
 
−
{{#set: reconstruction tool=meneco}}
 
−
{{#set: reconstruction comment=added for gapfilling}}
 
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
 

Revision as of 14:25, 26 August 2019

Reaction GUANOSINE-DIPHOSPHATASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • guanosine-diphosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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