Difference between revisions of "Charged-HIS-tRNAs"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-NADP+-RXN MALATE-DEHYDROGENASE-NADP+-RXN] == * direction: ** left-to-right * c...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13118 RXN-13118] == * direction: ** left-to-right * common-name: ** 2-deoxy-scyllo-inosamine de...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-NADP+-RXN MALATE-DEHYDROGENASE-NADP+-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13118 RXN-13118] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** malate dehydrogenase (nadp+)
+
** 2-deoxy-scyllo-inosamine dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.82 ec-1.1.1.82]
+
** [http://enzyme.expasy.org/EC/1.1.1.329 ec-1.1.1.329]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADPH]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[MAL]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[CPD-14122]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CPD-14123]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05075]]
+
* Gene: [[SJ16686]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
+
* [[PWY-7000]], kanamycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7000 PWY-7000]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
+
* [[PWY-7014]], paromamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7014 PWY-7014]
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33880 33880]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00343 R00343]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10130 R10130]
−
* UNIPROT:
+
** [http://www.genome.jp/dbget-bin/www_bget?R08892 R08892]
−
** [http://www.uniprot.org/uniprot/P15719 P15719]
 
−
** [http://www.uniprot.org/uniprot/P17606 P17606]
 
−
** [http://www.uniprot.org/uniprot/Q43830 Q43830]
 
−
** [http://www.uniprot.org/uniprot/P37229 P37229]
 
−
** [http://www.uniprot.org/uniprot/Q05145 Q05145]
 
−
** [http://www.uniprot.org/uniprot/P21528 P21528]
 
−
** [http://www.uniprot.org/uniprot/P52426 P52426]
 
−
** [http://www.uniprot.org/uniprot/Q08062 Q08062]
 
−
** [http://www.uniprot.org/uniprot/P93104 P93104]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=malate dehydrogenase (nadp+)}}
+
{{#set: common-name=2-deoxy-scyllo-inosamine dehydrogenase}}
−
{{#set: ec-number=ec-1.1.1.82}}
+
{{#set: ec-number=ec-1.1.1.329}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=2}}
 
{{#set: nb pathway associated=2}}

Revision as of 14:25, 26 August 2019

Reaction RXN-13118

  • direction:
    • left-to-right
  • common-name:
    • 2-deoxy-scyllo-inosamine dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7000, kanamycin biosynthesis: PWY-7000
    • 2 reactions found over 19 reactions in the full pathway
  • PWY-7014, paromamine biosynthesis I: PWY-7014
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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