Difference between revisions of "TRNA-Containing-N7-Methylguanine-46"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10965 RXN-10965] == * direction: ** reversible * common-name: ** bis(diphospho)inositol tetraki...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.1-RXN 1.14.11.1-RXN] == * direction: ** left-to-right * common-name: ** γ-butyrobetai...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10965 RXN-10965] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.14.11.1-RXN 1.14.11.1-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** bis(diphospho)inositol tetrakisphosphate phosphohydrolase
+
** γ-butyrobetaine dioxygenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.1.52 ec-3.6.1.52]
+
** [http://enzyme.expasy.org/EC/1.14.11.1 ec-1.14.11.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-11938]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[5-DIPHOSPHO-1D-MYO-INOSITOL-12346P]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GAMMA-BUTYROBETAINE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CARNITINE]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04934]]
+
* Gene: [[SJ01929]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11793]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ01883]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6100]], L-carnitine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6100 PWY-6100]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-3621]], &gamma;-butyrobetaine degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3621 PWY-3621]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: common-name=bis(diphospho)inositol tetrakisphosphate phosphohydrolase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24029 24029]
−
{{#set: ec-number=ec-3.6.1.52}}
+
* LIGAND-RXN:
−
{{#set: nb gene associated=1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02397 R02397]
−
{{#set: nb pathway associated=0}}
+
{{#set: direction=left-to-right}}
 +
{{#set: common-name=&gamma;-butyrobetaine dioxygenase}}
 +
{{#set: ec-number=ec-1.14.11.1}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction 1.14.11.1-RXN

  • direction:
    • left-to-right
  • common-name:
    • γ-butyrobetaine dioxygenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6100, L-carnitine biosynthesis: PWY-6100
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-3621, γ-butyrobetaine degradation: PWY-3621
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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