Difference between revisions of "3-P-SERINE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.1-RXN 3.4.11.1-RXN] == * direction: ** left-to-right * common-name: ** aminopeptidase * ec-n...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5408 RXN0-5408] == * direction: ** left-to-right * common-name: ** inositol monophosphatase *...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.1-RXN 3.4.11.1-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5408 RXN0-5408] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** aminopeptidase
+
** inositol monophosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.11.9 ec-3.4.11.9]
+
** [http://enzyme.expasy.org/EC/3.1.3.25 ec-3.1.3.25]
−
** [http://enzyme.expasy.org/EC/3.4.11.1 ec-3.4.11.1]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Protein-With-N-Terminal-X-Pro]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Amino-Acids-20]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Protein-With-N-Terminal-Pro]][c]
+
* 1 [[D-MYO-INOSITOL-1-MONOPHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MYO-INOSITOL]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21022]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ01133]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ00234]]
+
* Gene: [[SJ10706]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ18979]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04955]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05836]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ11258]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ21020]]
+
* Gene: [[SJ15444]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ21032]]
+
* Gene: [[SJ20976]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-4702]], phytate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4702 PWY-4702]
 +
** '''3''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
−
** [http://www.uniprot.org/uniprot/P27888 P27888]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27671 27671]
−
** [http://www.uniprot.org/uniprot/P00727 P00727]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P68767 P68767]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01185 R01185]
−
** [http://www.uniprot.org/uniprot/P45334 P45334]
 
−
** [http://www.uniprot.org/uniprot/Q9JTI8 Q9JTI8]
 
−
** [http://www.uniprot.org/uniprot/Q9PP04 Q9PP04]
 
−
** [http://www.uniprot.org/uniprot/P24828 P24828]
 
−
** [http://www.uniprot.org/uniprot/P23341 P23341]
 
−
** [http://www.uniprot.org/uniprot/P28839 P28839]
 
−
** [http://www.uniprot.org/uniprot/P30184 P30184]
 
−
** [http://www.uniprot.org/uniprot/P31427 P31427]
 
−
** [http://www.uniprot.org/uniprot/Q42876 Q42876]
 
−
** [http://www.uniprot.org/uniprot/Q48531 Q48531]
 
−
** [http://www.uniprot.org/uniprot/O24022 O24022]
 
−
** [http://www.uniprot.org/uniprot/Q10712 Q10712]
 
−
** [http://www.uniprot.org/uniprot/Q43034 Q43034]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=aminopeptidase}}
+
{{#set: common-name=inositol monophosphatase}}
−
{{#set: ec-number=ec-3.4.11.9|ec-3.4.11.1}}
+
{{#set: ec-number=ec-3.1.3.25}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=8}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 14:25, 26 August 2019

Reaction RXN0-5408

  • direction:
    • left-to-right
  • common-name:
    • inositol monophosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4702, phytate degradation I: PWY-4702
    • 3 reactions found over 14 reactions in the full pathway

Reconstruction information

External links





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