Difference between revisions of "CPD0-1812"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRCARBOXY-RXN AIRCARBOXY-RXN] == * direction: ** reversible * common-name: ** phosphoribosylaminoi...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYC3PDEHYDROGBIOSYN-RXN GLYC3PDEHYDROGBIOSYN-RXN] == * direction: ** left-to-right * common-name:...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRCARBOXY-RXN AIRCARBOXY-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYC3PDEHYDROGBIOSYN-RXN GLYC3PDEHYDROGBIOSYN-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** phosphoribosylaminoimidazole carboxylase
+
** glycerol-3-phosphate dehydrogenase
 +
** glycerol-3-phosphate dehydrogenase [nad+]
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.21 ec-4.1.1.21]
+
** [http://enzyme.expasy.org/EC/1.1.1.94 ec-1.1.1.94]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[DIHYDROXY-ACETONE-PHOSPHATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18574]]
+
* Gene: [[SJ00878]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ11301]]
+
* Gene: [[SJ16475]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
+
* [[PWY-7902]], glucosylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7902 PWY-7902]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5981]], CDP-diacylglycerol biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5981 PWY-5981]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1319 PWY0-1319]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10794 10794]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11094 11094]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04209 R04209]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00844 R00844]
−
* UNIPROT:
+
** [http://www.genome.jp/dbget-bin/www_bget?R05680 R05680]
−
** [http://www.uniprot.org/uniprot/Q9RYC6 Q9RYC6]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/Q9PPK5 Q9PPK5]
+
{{#set: common-name=glycerol-3-phosphate dehydrogenase|glycerol-3-phosphate dehydrogenase [nad+]}}
−
** [http://www.uniprot.org/uniprot/O66608 O66608]
+
{{#set: ec-number=ec-1.1.1.94}}
−
** [http://www.uniprot.org/uniprot/O67239 O67239]
 
−
** [http://www.uniprot.org/uniprot/P12045 P12045]
 
−
** [http://www.uniprot.org/uniprot/P09029 P09029]
 
−
** [http://www.uniprot.org/uniprot/P12044 P12044]
 
−
** [http://www.uniprot.org/uniprot/P21264 P21264]
 
−
** [http://www.uniprot.org/uniprot/P0AG18 P0AG18]
 
−
** [http://www.uniprot.org/uniprot/P15567 P15567]
 
−
** [http://www.uniprot.org/uniprot/Q9XAY8 Q9XAY8]
 
−
** [http://www.uniprot.org/uniprot/P43849 P43849]
 
−
** [http://www.uniprot.org/uniprot/Q9JTS6 Q9JTS6]
 
−
** [http://www.uniprot.org/uniprot/P43850 P43850]
 
−
** [http://www.uniprot.org/uniprot/Q58033 Q58033]
 
−
** [http://www.uniprot.org/uniprot/Q9WYS8 Q9WYS8]
 
−
** [http://www.uniprot.org/uniprot/P22234 P22234]
 
−
** [http://www.uniprot.org/uniprot/P22348 P22348]
 
−
** [http://www.uniprot.org/uniprot/Q01930 Q01930]
 
−
** [http://www.uniprot.org/uniprot/P55195 P55195]
 
−
** [http://www.uniprot.org/uniprot/P50504 P50504]
 
−
** [http://www.uniprot.org/uniprot/Q55498 Q55498]
 
−
** [http://www.uniprot.org/uniprot/P74724 P74724]
 
−
** [http://www.uniprot.org/uniprot/O80937 O80937]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=phosphoribosylaminoimidazole carboxylase}}
 
−
{{#set: ec-number=ec-4.1.1.21}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:25, 26 August 2019

Reaction GLYC3PDEHYDROGBIOSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • glycerol-3-phosphate dehydrogenase
    • glycerol-3-phosphate dehydrogenase [nad+]
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7902, glucosylglycerol biosynthesis: PWY-7902
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5981, CDP-diacylglycerol biosynthesis III: PWY-5981
    • 3 reactions found over 5 reactions in the full pathway
  • PWY0-1319, CDP-diacylglycerol biosynthesis II: PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5667, CDP-diacylglycerol biosynthesis I: PWY-5667
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Property "Common-name" (as page type) with input value "glycerol-3-phosphate dehydrogenase [nad+" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=CPD0-1812&oldid=22279"