Difference between revisions of "Ferrihemoglobins"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8668 RXN-8668] == * direction: ** left-to-right * common-name: ** protein-methionine-s-oxide re...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPDEHYRHAMREDUCT-RXN DTDPDEHYRHAMREDUCT-RXN] == * direction: ** left-to-right * common-name: ** d...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8668 RXN-8668] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTDPDEHYRHAMREDUCT-RXN DTDPDEHYRHAMREDUCT-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** protein-methionine-s-oxide reductase
+
** dtdp-4-dehydrorhamnose reductase
−
** peptide-methionine (s)-s-oxide reductase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.8.4.11 ec-1.8.4.11]
+
** [http://enzyme.expasy.org/EC/1.1.1.133 ec-1.1.1.133]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Protein-L-methionine-S-S-oxides]][c] '''+''' 1 [[Red-Thioredoxin]][c] '''=>''' 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[Protein-L-methionine]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[DTDP-DEOH-DEOXY-MANNOSE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[DTDP-RHAMNOSE]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ22556]]
−
* Gene: [[SJ18862]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ15414]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13438]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ17262]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ20421]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ17035]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ03909]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ17041]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=DTDPRHAMSYN-PWY DTDPRHAMSYN-PWY]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14219 14219]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21796 21796]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04120 R04120]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02777 R02777]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9JV74 Q9JV74]
 +
** [http://www.uniprot.org/uniprot/P37760 P37760]
 +
** [http://www.uniprot.org/uniprot/Q46769 Q46769]
 +
** [http://www.uniprot.org/uniprot/O33664 O33664]
 +
** [http://www.uniprot.org/uniprot/O66251 O66251]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=peptide-methionine (s)-s-oxide reductase|protein-methionine-s-oxide reductase}}
+
{{#set: common-name=dtdp-4-dehydrorhamnose reductase}}
−
{{#set: ec-number=ec-1.8.4.11}}
+
{{#set: ec-number=ec-1.1.1.133}}
−
{{#set: nb gene associated=8}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 14:25, 26 August 2019

Reaction DTDPDEHYRHAMREDUCT-RXN

  • direction:
    • left-to-right
  • common-name:
    • dtdp-4-dehydrorhamnose reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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