Difference between revisions of "ATDTD"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15278 RXN-15278] == * direction: ** left-to-right * common-name: ** β-n-acetylglucosaminyl...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENPRIBOSYLTRAN-RXN ADENPRIBOSYLTRAN-RXN] == * direction: ** left-to-right * common-name: ** adeni...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15278 RXN-15278] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENPRIBOSYLTRAN-RXN ADENPRIBOSYLTRAN-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** β-n-acetylglucosaminylglycopeptide β-1,4-galactosyltransferase
+
** adenine phosphoribosyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.38 ec-2.4.1.38]
+
** [http://enzyme.expasy.org/EC/2.4.2.7 ec-2.4.2.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-14553]][c] '''+''' 1 [[CPD-16494]][c] '''=>''' 1 [[I-antigens]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[ADENINE]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ14181]]
+
* Gene: [[SJ15126]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12523]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7837]], i antigen and I antigen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7837 PWY-7837]
+
* [[PWY-7807]], glyphosate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7807 PWY-7807]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7434]], terminal O-glycans residues modification (via type 2 precursor disaccharide): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7434 PWY-7434]
+
* [[PWY-6610]], adenine salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6610 PWY-6610]
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7805]], (aminomethyl)phosphonate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7805 PWY-7805]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6605]], adenine and adenosine salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6605 PWY-6605]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[P121-PWY]], adenine and adenosine salvage I: [http://metacyc.org/META/NEW-IMAGE?object=P121-PWY P121-PWY]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16609 16609]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00190 R00190]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P12426 P12426]
 +
** [http://www.uniprot.org/uniprot/Q9X1A4 Q9X1A4]
 +
** [http://www.uniprot.org/uniprot/P47202 P47202]
 +
** [http://www.uniprot.org/uniprot/O34443 O34443]
 +
** [http://www.uniprot.org/uniprot/O25296 O25296]
 +
** [http://www.uniprot.org/uniprot/P47518 P47518]
 +
** [http://www.uniprot.org/uniprot/Q9PP06 Q9PP06]
 +
** [http://www.uniprot.org/uniprot/P43856 P43856]
 +
** [http://www.uniprot.org/uniprot/O51718 O51718]
 +
** [http://www.uniprot.org/uniprot/Q9ZLQ9 Q9ZLQ9]
 +
** [http://www.uniprot.org/uniprot/P69503 P69503]
 +
** [http://www.uniprot.org/uniprot/P07741 P07741]
 +
** [http://www.uniprot.org/uniprot/P08030 P08030]
 +
** [http://www.uniprot.org/uniprot/P31166 P31166]
 +
** [http://www.uniprot.org/uniprot/P36973 P36973]
 +
** [http://www.uniprot.org/uniprot/P52561 P52561]
 +
** [http://www.uniprot.org/uniprot/Q42563 Q42563]
 +
** [http://www.uniprot.org/uniprot/Q49639 Q49639]
 +
** [http://www.uniprot.org/uniprot/P73935 P73935]
 +
** [http://www.uniprot.org/uniprot/Q9SUW2 Q9SUW2]
 +
** [http://www.uniprot.org/uniprot/Q43199 Q43199]
 +
** [http://www.uniprot.org/uniprot/Q9SU38 Q9SU38]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=&beta;-n-acetylglucosaminylglycopeptide &beta;-1,4-galactosyltransferase}}
+
{{#set: common-name=adenine phosphoribosyltransferase}}
−
{{#set: ec-number=ec-2.4.1.38}}
+
{{#set: ec-number=ec-2.4.2.7}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=5}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 14:26, 26 August 2019

Reaction ADENPRIBOSYLTRAN-RXN

  • direction:
    • left-to-right
  • common-name:
    • adenine phosphoribosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7807, glyphosate degradation III: PWY-7807
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6610, adenine salvage: PWY-6610
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7805, (aminomethyl)phosphonate degradation: PWY-7805
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6605, adenine and adenosine salvage II: PWY-6605
    • 1 reactions found over 2 reactions in the full pathway
  • P121-PWY, adenine and adenosine salvage I: P121-PWY
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ATDTD&oldid=23103"