Difference between revisions of "RXN-37"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FACOAE182 FACOAE182] == * direction: ** left-to-right * common-name: ** linoleoyl-coa hydrolase ==...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN] == * direction: ** reversible * ec-number: ** [http://enzyme...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN] == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
− | * | + | * ec-number: |
− | ** | + | ** [http://enzyme.expasy.org/EC/1.2.7.1 ec-1.2.7.1] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 | + | * 1 [[CO-A]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[PYRUVATE]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ19470]] |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
+ | * Gene: [[SJ09312]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[SJ15200]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[NPGLUCAT-PWY]], Entner-Doudoroff pathway II (non-phosphorylative): [http://metacyc.org/META/NEW-IMAGE?object=NPGLUCAT-PWY NPGLUCAT-PWY] | ||
+ | ** '''4''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-5493]], reductive monocarboxylic acid cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5493 PWY-5493] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863] | ||
+ | ** '''9''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-6587]], pyruvate fermentation to ethanol III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6587 PWY-6587] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6588]], pyruvate fermentation to acetone: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6588 PWY-6588] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497] | ||
+ | ** '''10''' reactions found over '''24''' reactions in the full pathway | ||
+ | * [[PWY-6583]], pyruvate fermentation to butanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583] | ||
+ | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-5483]], pyruvate fermentation to acetate III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5483 PWY-5483] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[CENTFERM-PWY]], pyruvate fermentation to butanoate: [http://metacyc.org/META/NEW-IMAGE?object=CENTFERM-PWY CENTFERM-PWY] | ||
+ | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[P42-PWY]], incomplete reductive TCA cycle: [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] | ||
+ | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-5392]], reductive TCA cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392] | ||
+ | ** '''6''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[P142-PWY]], pyruvate fermentation to acetate I: [http://metacyc.org/META/NEW-IMAGE?object=P142-PWY P142-PWY] | ||
+ | ** '''2''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[GLUDEG-II-PWY]], L-glutamate degradation VII (to butanoate): [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-II-PWY GLUDEG-II-PWY] | ||
+ | ** '''3''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142] | ||
+ | ** '''10''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-5538]], pyruvate fermentation to acetate VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5538 PWY-5538] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] | ||
+ | ** '''9''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-6876]], isopropanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6876 PWY-6876] | ||
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5600]], pyruvate fermentation to acetate VII: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5600 PWY-5600] | ||
+ | ** '''2''' reactions found over '''1''' reactions in the full pathway | ||
+ | </div> | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[orthology]]; source: [[ | + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
== External links == | == External links == | ||
− | {{#set: direction= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12768 12768] |
− | {{#set: nb pathway associated= | + | * LIGAND-RXN: |
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R01196 R01196] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q57957 Q57957] | ||
+ | ** [http://www.uniprot.org/uniprot/O28574 O28574] | ||
+ | ** [http://www.uniprot.org/uniprot/Q56316 Q56316] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9R503 Q9R503] | ||
+ | ** [http://www.uniprot.org/uniprot/Q57714 Q57714] | ||
+ | ** [http://www.uniprot.org/uniprot/O05651 O05651] | ||
+ | ** [http://www.uniprot.org/uniprot/Q57715 Q57715] | ||
+ | ** [http://www.uniprot.org/uniprot/O27771 O27771] | ||
+ | ** [http://www.uniprot.org/uniprot/O28572 O28572] | ||
+ | ** [http://www.uniprot.org/uniprot/Q56317 Q56317] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UWL2 Q9UWL2] | ||
+ | ** [http://www.uniprot.org/uniprot/P56810 P56810] | ||
+ | ** [http://www.uniprot.org/uniprot/O28571 O28571] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UWL1 Q9UWL1] | ||
+ | ** [http://www.uniprot.org/uniprot/Q57717 Q57717] | ||
+ | ** [http://www.uniprot.org/uniprot/O25312 O25312] | ||
+ | ** [http://www.uniprot.org/uniprot/O25738 O25738] | ||
+ | ** [http://www.uniprot.org/uniprot/O25739 O25739] | ||
+ | ** [http://www.uniprot.org/uniprot/O58411 O58411] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UYZ4 Q9UYZ4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9UYZ3 Q9UYZ3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59455 Q59455] | ||
+ | ** [http://www.uniprot.org/uniprot/Q59456 Q59456] | ||
+ | ** [http://www.uniprot.org/uniprot/P80521 P80521] | ||
+ | ** [http://www.uniprot.org/uniprot/P80522 P80522] | ||
+ | ** [http://www.uniprot.org/uniprot/P80523 P80523] | ||
+ | ** [http://www.uniprot.org/uniprot/P80524 P80524] | ||
+ | ** [http://www.uniprot.org/uniprot/P95903 P95903] | ||
+ | ** [http://www.uniprot.org/uniprot/P95904 P95904] | ||
+ | ** [http://www.uniprot.org/uniprot/Q51799 Q51799] | ||
+ | ** [http://www.uniprot.org/uniprot/Q51800 Q51800] | ||
+ | ** [http://www.uniprot.org/uniprot/Q51802 Q51802] | ||
+ | ** [http://www.uniprot.org/uniprot/Q51803 Q51803] | ||
+ | ** [http://www.uniprot.org/uniprot/Q51804 Q51804] | ||
+ | ** [http://www.uniprot.org/uniprot/Q51805 Q51805] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: ec-number=ec-1.2.7.1}} | ||
+ | {{#set: nb gene associated=3}} | ||
+ | {{#set: nb pathway associated=18}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}} |
Revision as of 14:26, 26 August 2019
Contents
Reaction PYRUFLAVREDUCT-RXN
- direction:
- reversible
- ec-number:
Reaction formula
- 1 CO-A[c] + 2 Oxidized-ferredoxins[c] + 1 PYRUVATE[c] <=> 1 ACETYL-COA[c] + 1 CARBON-DIOXIDE[c] + 1 PROTON[c] + 2 Reduced-ferredoxins[c]
Gene(s) associated with this reaction
- Gene: SJ19470
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ09312
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ15200
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- NPGLUCAT-PWY, Entner-Doudoroff pathway II (non-phosphorylative): NPGLUCAT-PWY
- 4 reactions found over 9 reactions in the full pathway
- PWY-5493, reductive monocarboxylic acid cycle: PWY-5493
- 1 reactions found over 2 reactions in the full pathway
- PWY-6863, pyruvate fermentation to hexanol (engineered): PWY-6863
- 9 reactions found over 11 reactions in the full pathway
- PWY-6587, pyruvate fermentation to ethanol III: PWY-6587
- 2 reactions found over 3 reactions in the full pathway
- PWY-6588, pyruvate fermentation to acetone: PWY-6588
- 2 reactions found over 5 reactions in the full pathway
- PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
- 10 reactions found over 24 reactions in the full pathway
- PWY-6583, pyruvate fermentation to butanol I: PWY-6583
- 6 reactions found over 8 reactions in the full pathway
- PWY-5483, pyruvate fermentation to acetate III: PWY-5483
- 1 reactions found over 2 reactions in the full pathway
- CENTFERM-PWY, pyruvate fermentation to butanoate: CENTFERM-PWY
- 5 reactions found over 7 reactions in the full pathway
- P42-PWY, incomplete reductive TCA cycle: P42-PWY
- 5 reactions found over 7 reactions in the full pathway
- PWY-5392, reductive TCA cycle II: PWY-5392
- 6 reactions found over 12 reactions in the full pathway
- P142-PWY, pyruvate fermentation to acetate I: P142-PWY
- 2 reactions found over 1 reactions in the full pathway
- GLUDEG-II-PWY, L-glutamate degradation VII (to butanoate): GLUDEG-II-PWY
- 3 reactions found over 2 reactions in the full pathway
- PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
- 10 reactions found over 13 reactions in the full pathway
- PWY-5538, pyruvate fermentation to acetate VI: PWY-5538
- 2 reactions found over 2 reactions in the full pathway
- P23-PWY, reductive TCA cycle I: P23-PWY
- 9 reactions found over 12 reactions in the full pathway
- PWY-6876, isopropanol biosynthesis (engineered): PWY-6876
- 2 reactions found over 5 reactions in the full pathway
- PWY-5600, pyruvate fermentation to acetate VII: PWY-5600
- 2 reactions found over 1 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links